3300007570: Marine sponge C. singaporensis microbiome, Papua New Guinea CO2 seep, Dobu 'bubble', co11ds

Overview

Basic Information

• IMG/M Taxon OID: 3300007570
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124804 | Ga0101524
• Sample Name: Marine sponge C. singaporensis microbiome, Papua New Guinea CO2 seep, Dobu 'bubble', co11ds
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 123158199
• Sequencing Scaffolds: 8
• Novel Protein Genes: 8
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	7
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Clitellata → Hirudinea → Rhynchobdellida → Glossiphoniidae → Helobdella → Helobdella robusta	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Coelocarteria Singaporensis (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Papua New Guinea
• Coordinates
  • Lat. (^o): -9.73665
  • Long. (^o): 150.867667
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F085224	Metagenome	111	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0101524_1022154	Not Available	993
Ga0101524_1025105	Not Available	926
Ga0101524_1025221	Not Available	924
Ga0101524_1026705	Not Available	897
Ga0101524_1053653	Not Available	616
Ga0101524_1056030	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Clitellata → Hirudinea → Rhynchobdellida → Glossiphoniidae → Helobdella → Helobdella robusta	601
Ga0101524_1062520	Not Available	563
Ga0101524_1069180	Not Available	531

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0101524_1022154	Ga0101524_10221541	F085224	AHIRHPRIYLRPYRRLITRTLNGCSYQDLLRFKAIVMFPYSIWSGVMLELLEIGVPVFYPSKRLLKRWHERYEMVYQRSSGGHRSAGGFSNIAYGADSAPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRDARWAEIKRDLTKTG*
Ga0101524_1025105	Ga0101524_10251052	F085224	MFYPSKRLLKRWDEKYGMMFHRTNAFGERRAGGFSNIAYGKDSAPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDTRWAEIRRDLTKTSSTPA*
Ga0101524_1025221	Ga0101524_10252211	F085224	FSYQDLLRFKAIVMFPYSIWSGVMLELLEMGVPMFYPSKILLKRWHERYEMVYQRSSGGRRSAGGFSNIAYGKDSAPDPNDSVNCEALHYWLEKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLAKTSSTPA*
Ga0101524_1026705	Ga0101524_10267052	F085224	MFYPSKRLLKRWDEKYGMMFHRTNAFGERRAGGFSNIAYGANSAPDPNDSVNQEALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDARWAEIRRDLTKTNSTGV*
Ga0101524_1053653	Ga0101524_10536532	F085224	LNGFSYQDLLRFKAIVMFPYSAFSGIMLELIEMGVPMFYPSKSLLKRWDESYGMMFQRTSGYGRRSAGGFSNIAYGKDSAPDPNDGVNREALHYWLEKSEWYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRDERWAEIKRDLTKTSSTPA*
Ga0101524_1056030	Ga0101524_10560301	F085224	FSYQDLLRFKAIVMFPYSIWSGVMLELLEMGVPVFYPSKILLKRWHERYEMVYQRSSGGRRSAGGFSNIAYGKDSAPDPNDSVNREALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLAKTA*
Ga0101524_1062520	Ga0101524_10625202	F085224	MGVPMFYPSKSLLKRWDESYGMMFQRTSGYGRRSAGGFSNIAYGKDLMPDPNDGVNRESLHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTA*
Ga0101524_1069180	Ga0101524_10691801	F085224	LLKRWDESYGMMFHRTSAFGARRAGGLSNIAYGKSAMPDPNDGVNREALHYWLDKSEWYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTA*