3300007221: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_C1_LD (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300007221
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123876 | Ga0099765
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_C1_LD (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 93622529
• Sequencing Scaffolds: 10
• Novel Protein Genes: 10
• Associated Families: 9

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	7
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1
All Organisms → cellular organisms → Eukaryota	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Austria: Klosterneuburg
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F009934	Metagenome / Metatranscriptome	311	Y
F017318	Metagenome / Metatranscriptome	241	Y
F019117	Metagenome / Metatranscriptome	231	Y
F030442	Metagenome / Metatranscriptome	185	Y
F034482	Metagenome / Metatranscriptome	174	Y
F051952	Metatranscriptome	143	N
F056350	Metagenome / Metatranscriptome	137	Y
F070166	Metatranscriptome	123	N
F082866	Metagenome / Metatranscriptome	113	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0099765_1073052	Not Available	967
Ga0099765_1091340	Not Available	546
Ga0099765_1209290	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	539
Ga0099765_1242076	Not Available	584
Ga0099765_1284210	Not Available	580
Ga0099765_1308146	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	926
Ga0099765_1318413	Not Available	622
Ga0099765_1323009	Not Available	926
Ga0099765_1324148	All Organisms → cellular organisms → Eukaryota	741
Ga0099765_1325764	Not Available	604

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099765_1073052	Ga0099765_10730521	F051952	MPKNPRQTIAPDHFTSTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEIVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRSIFTSLEDVVSANPQDRLIRMREVFGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFPPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTSD
Ga0099765_1091340	Ga0099765_10913401	F051952	PDHFTSTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGTEVFTFRAVFTSLEDVVSANPQDRLNRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTS
Ga0099765_1209290	Ga0099765_12092901	F030442	ATASMVSQILFIGATAANTATVELVSALEDHLPGFSANWTSNMSSGDYPMNRSTDDNTYASVIGPKVSSKTIAIGTVEVSTALRRTEIEDIKANTGMDIVQKMESILVNELSQTISKQIVAKVFEMGDLNRSTAPLRGGVSIFDLNTSYVTGVGGETTHAVQRKLITKMVHASNYIATE
Ga0099765_1242076	Ga0099765_12420761	F019117	KMSVLAKVVLVLAIVAAVSAQKNKPKFSDSFTSNVEFVEVFNGQNFSIYGSWYVDFVGRQHAFHANDQTFGPMQIYRYYNLSKQYEFYVNSGFCNEQMGMRLPFFGTFDFLAKASNTGNCADRHGNNGLMWTATINSQPGSGFELNLCASATANIPYFIDMRGQWNYQDFERQVQFLGYYPGTPDPSLFKLPQQ
Ga0099765_1284210	Ga0099765_12842101	F034482	TYAAEYPAVNKAGEYTLTPLVNGEPVKDAPFTVKVAAGGFDPNNTGVDMPNPGFAGRRGPKVSVKDNQGNLRAGFDDDVEADLTPKIKIPKVKAKNNGDGTYDIEYPPNLLPGDYEIDIRVNGAQAPKAPFTGPVQQNPVKPEQSQALKDLVGKDSAVFERLFLSATDSERDQIINALNGLKK*
Ga0099765_1308146	Ga0099765_13081461	F056350	VSFHEIQSLWGFFALIIVFSQIVSGIMLSFSLIPDSMLIPMARDEEDCEDLVTDDFFWVHERGVDLVFIFTYLHLFRKFYLNLIEYEHEVT*
Ga0099765_1318413	Ga0099765_13184131	F009934	MREPLDGPAMRPETPLAVENGVGKLAAYMAPNVSMGKRA
Ga0099765_1323009	Ga0099765_13230091	F070166	PVPNVVLSGVVMNLDNYVVQIHRRTKRITLQRFLISKIAYGEDFSLIELAALFHNQLWLQTKCQVDPHFKVKFGMTLEVIASFLKECNFSRGLQPATISRMKAKALTLEGDFLIPKRNLPNLEAQLRNSISTKWRKPEGVEVSKLPPKQHVGKGYRDHGTAQKPEIDGSPSWQLVGSEFGNLERESTELILKLMKIIEGTSNDSITEQVKQIQRTVAVHEAIKRIHPNWRNTEIAEASEGKIRLKFKAEK*
Ga0099765_1324148	Ga0099765_13241481	F082866	MHHQLPNRKRTLNLLLRKASGSGKICVLGQIEPQTPRLVVSFRQYLQVSVLQPYSPQNPKPSGFPGDASRPTSEMVSFKA*
Ga0099765_1325764	Ga0099765_13257641	F017318	LFDMYRIDKIEVAWYPEYTVLSDSGLVSNAVDVQVNTAIAQISNTPTVVSDVLQYKTCVGTGITQIHKRSFQPSYLMDGICPCSCFLSCNNATANWYGVAYGVAPTGTAMLFKSRAKFFMSFVQSR*