3300007197: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_5L (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300007197
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123891 | Ga0099780
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_5L (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 68761870
• Sequencing Scaffolds: 10
• Novel Protein Genes: 12
• Associated Families: 12

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	4
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	2
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Klosterneuburg, Austria
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001758	Metagenome / Metatranscriptome	640	Y
F004408	Metagenome / Metatranscriptome	439	Y
F014988	Metagenome / Metatranscriptome	258	Y
F017318	Metagenome / Metatranscriptome	241	Y
F025291	Metagenome / Metatranscriptome	202	N
F045132	Metagenome / Metatranscriptome	153	Y
F051952	Metatranscriptome	143	N
F052619	Metagenome / Metatranscriptome	142	Y
F056350	Metagenome / Metatranscriptome	137	Y
F067727	Metagenome / Metatranscriptome	125	Y
F070166	Metatranscriptome	123	N
F105419	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0099780_1000138	Not Available	858
Ga0099780_1008123	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	2106
Ga0099780_1009174	Not Available	794
Ga0099780_1027857	Not Available	726
Ga0099780_1072160	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	538
Ga0099780_1120246	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C	580
Ga0099780_1202413	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	885
Ga0099780_1217889	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum	2259
Ga0099780_1218502	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	894
Ga0099780_1220280	Not Available	820

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099780_1000138	Ga0099780_10001381	F070166	ITLQRFLVSKIAYGKDFSLTELAALFHNQLWLQVKCETDVHFKEKFGGTLEALAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEISKLPPKSFIGKGYRDHGTAPSPEIDGSPSWQEVGSEFSNLEREHTEAFLFLLKVIDNDPNVSIQERLQGLKRAIEVTERIKRIHPNWRNSQITEASKGRIIDAKKVKKVIP*
Ga0099780_1008123	Ga0099780_10081232	F004408	ENSDLNFLKFLNKSQVDSFYSLDNNEQETVKLYINEKSYYSTKDVLNLISEALSARNETLEDRVIRLMPENIKPIWNQLNESSRKSILSQARLYPEDVMQSESQLDHFWLTRNLKKNESVTKKLVSHESLIQEDKISDNELTAIMERFKNL*
Ga0099780_1009174	Ga0099780_10091741	F045132	VLMHSSNHYPLGNCDSPKPETSLDYLTRLGAVSHHSSSPSSLFAYTDSVRTLPEELVNPASAAKYISTRLQRGLVNQPDLAFPRSPGRILETAADQ
Ga0099780_1027857	Ga0099780_10278571	F051952	FTTTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLEDVVSANPQDRLNRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN*
Ga0099780_1065064	Ga0099780_10650641	F001758	SQVTGERSGQAGWRDSSQAGAQVPGAEAEFTSSSGDVRASSVYAKKELGDEER*
Ga0099780_1072160	Ga0099780_10721601	F067727	LSGGKSEVVYTIVEQVEDGHLAYIKDSWFLLTDDSIEKTLLENHVKDDNRMKTLRSLQTAMQFATINESRIDFRISEYLTIGLSVNDSTIFINEDELSEDTSLENLFSSPIVPIVNRNFYPLLVEVSNNIDSFVELDVVKRVSNLISPTLEVFAFNYKKNTFIYRCDERYGNSFFKYES
Ga0099780_1120246	Ga0099780_11202461	F017318	SKCRGDPSGISFNQLWLSPRVGSHYLLTKSQNKRAVKRRASRNKSPLPNMGIPLQGAPLKFQRTVEDAFNIVCDGINPSVGTFNFSLNDLPNYTEFTALFDMYKIDKIEIEFYPEYTVLSDGGVTSPAIDVQLNTAVDPTGQSVTAVSDVLQYSTLVATGISKNHKRTFVSSYLMDGILPCACYISTASPSSN
Ga0099780_1197547	Ga0099780_11975471	F052619	MNTPVYRPVHKFSRTVEGAYDIICDGITPSLSGLIFQLSSLPSFTDFTNLFDMYRITKIEIDWVPEYTELTDAALVSNAVNVRFNSVVDISDAAAPLAVNDLLQYETVKSTSITKGHSRSWKPCFLMNALVPCSCWLPTSAPNE
Ga0099780_1202413	Ga0099780_12024131	F105419	MRKLFALGALMVAAAVSNGCISNTMYGCEITETLAPGASEGEVVMKHGAPDNIVYLGNQYCNPQTGERGEVDKYLYEYRIGGGTTLLGWLFASDEFHNIAYLIEGGRVMGGGYVGEGKGSIILGNNFGVVSTPLGVFDMNFGGFVHPKARAGYGGDGTPERQ
Ga0099780_1217889	Ga0099780_12178892	F014988	MSFNPASPIIGAAVPGFTNPTYTIVVDTAPNINGKQYAVTVMGGTQVGVDANSVSKPFTLTFFRPAVLRVLPAVNPVTGVVKNIPVNSYKLITRKGAVPAVNQSIQVARITTVIEVPAGTDTYEPEDIKAMISAHFGAGYANASGIADTVITGVL*
Ga0099780_1218502	Ga0099780_12185021	F056350	KNLLSYFAVLTVSFHEIQSLWGFFALIIVFSQIVSGIMLSFSLIPDSMLIPMARDEEDCEDLVTDDFFWVHERGVDLVFIFTYLHLFRKFYLNLIEYEHEVT*
Ga0099780_1220280	Ga0099780_12202801	F025291	HMVNLRKEINIFRDRAWRVITYNYHLGDHSSTGLYTLNVGADQRYMTFQTLLTTDEFQNMSVVYNEFKIHKAVFTSLPTSNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSSRIFAPKALNAQSCEWNLQGVGPNFNVWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK*