Sample 3300007115

Overview

Basic Information
IMG/M Taxon OID	3300007115 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117787 \| Gp0124745 \| Ga0101551
Sample Name	Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble', st44is
Sequencing Status	Finished
Sequencing Center	University of New South Wales
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	182683688
Sequencing Scaffolds	11
Novel Protein Genes	11
Associated Families	11

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	8
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
Type	Host-Associated
Taxonomy	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Marine Sponge (Stylissa Sp.) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Upa-Upasina (low pH), Papua New Guinea
Coordinates	Lat. (^o)	-9.8241	Long. (^o)	150.825833	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F004325	Metagenome / Metatranscriptome	443	Y
F016820	Metagenome	244	Y
F020710	Metagenome / Metatranscriptome	222	Y
F023877	Metagenome / Metatranscriptome	208	Y
F043451	Metagenome	156	N
F051267	Metagenome	144	N
F053343	Metagenome / Metatranscriptome	141	Y
F064809	Metagenome	128	N
F077401	Metagenome	117	N
F085224	Metagenome	111	N

Scaffold	Taxonomy	Length	IMG/M Link
Ga0101551_1015617	Not Available	1300	Open in IMG/M
Ga0101551_1027109	Not Available	1049	Open in IMG/M
Ga0101551_1034348	Not Available	957	Open in IMG/M
Ga0101551_1041471	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
Ga0101551_1046008	Not Available	848	Open in IMG/M
Ga0101551_1074360	Not Available	685	Open in IMG/M
Ga0101551_1092027	Not Available	618	Open in IMG/M
Ga0101551_1104859	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	577	Open in IMG/M
Ga0101551_1106489	Not Available	573	Open in IMG/M
Ga0101551_1114279	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	551	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0101551_1015617

Not Available

1300

Open in IMG/M

Ga0101551_1027109

Not Available

1049

Open in IMG/M

Ga0101551_1034348

Not Available

957

Open in IMG/M

Ga0101551_1041471

All Organisms → cellular organisms → Bacteria

886

Open in IMG/M

Ga0101551_1046008

Not Available

848

Open in IMG/M

Ga0101551_1074360

Not Available

685

Open in IMG/M

Ga0101551_1092027

Not Available

618

Open in IMG/M

Ga0101551_1104859

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium

577

Open in IMG/M

Ga0101551_1106489

Not Available

573

Open in IMG/M

Ga0101551_1114279

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.

551

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0101551_1015617	Ga0101551_10156173	F023877	VDDHYKNFGFYPYEVEVDGQVYSYGTYWEILEDGRFD*
Ga0101551_1027109	Ga0101551_10271093	F043451	MITGKCILVETMSNIHEWIYPPQPSVDRIMYIPTRSVHILEYQEEMIDAEGNVYWKTVDTTTIGASTSVKEFLEQMKDYYETKSCRNNRIQS*
Ga0101551_1034348	Ga0101551_10343482	F087060	MYTIITTKPMTQSHTTSNDTSAKQVVRTLSGITQGKPVVTGDAPQTKKFDPVADQDNRLMQMLELSLAIKDKKSEYDDLRKSFTNDLKAALDDNEENPKIRHSENERVHVYLSKRRVYKYSDKLTAKRLKLEAQMADLKDEEAKEVRHNKAELTKETFTVSFKG*
Ga0101551_1041471	Ga0101551_10414712	F020710	VTATIARADAADSMMFKVTSDTTFKIFNMDAITDTTANGDGVFISDTASDEGKAAYIVSRVNYLRPAKAVGWNDIQGFIDFASQIGGGDA*
Ga0101551_1046008	Ga0101551_10460081	F077401	MTMKTFWAWKHDINSTHKNMSGYTKILARDMNSAYRKAHKHYKHHMFNSDFNVSVMSGETDKHGYAKEVQYSTGKWTRKAWSTYKYFHSLEPEMQERVHNHYKEFGDDWKGQDKTDLRFLVALLRQEPAND*
Ga0101551_1074360	Ga0101551_10743602	F064809	MLTTTFTGNITFAEIVSQDGQGNNLDNPFLAIKVAVNDVNDNGLTIAVRTKNGLLEAAQNGEDLVGTRVVIAGSIELPSIRSHWVDNDGNLVALKKPQCRVYANTIERLNRKPAPDTVQKELAIK*
Ga0101551_1092027	Ga0101551_10920271	F016820	LMTKKEFSYIVFSSCGDNVQEIHGVYKDLEGAAYGAKAALSTLFPNHGDKAEIIRCEIISTEEARVTYEKTKPKDIFEKCEDGFCPMPTPQTQEVS*
Ga0101551_1104859	Ga0101551_11048591	F004325	PIGSPQLIGIGGTDVQSQLAAGNRDEYANIRMKQGDTRVVEGAKMPSDLDASYLKLNLPGSPLPANGLLVPQNLRAAERNQDMIGVSEQMFLAKYLPAAGLTQLPVGQPPLESKKGKK*
Ga0101551_1106489	Ga0101551_11064891	F051267	AICWINYTNAQAIFTYANHEQEMAETEFRLDDSADESEVISKLIKSYFDMDNAEDREMISDIVKVSFCFSDTEYPQKLKKKEAEKFWALPTMKAFLERNGKYYFDEEQRDDVETSIKELLDCWKEEIV*
Ga0101551_1114279	Ga0101551_11142791	F053343	LSLGGYNEYIKRNLSLHSNHHSIMNPQAHRSTEELKTIVKALSKLSLLNTPEEDQRLFECEQELRKRKKEQDFIDAHFQVITF*
Ga0101551_1128691	Ga0101551_11286911	F085224	MFPYSVFSGMMLELLEMGAPMFYPSKSLLKRWDEQYGIMTQRTSAEGKRNAGGFSNVAYGKDSAPDPNDSVNQDALHYWLEKSEWYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRDERWAEIRRDLTKTNSSGV*

Scaffold ID

Protein ID

Family

Sequence

Ga0101551_1015617

Ga0101551_10156173

F023877

VDDHYKNFGFYPYEVEVDGQVYSYGTYWEILEDGRFD*

Ga0101551_1027109

Ga0101551_10271093

F043451

MITGKCILVETMSNIHEWIYPPQPSVDRIMYIPTRSVHILEYQEEMIDAEGNVYWKTVDTTTIGASTSVKEFLEQMKDYYETKSCRNNRIQS*

Ga0101551_1034348

Ga0101551_10343482

F087060

MYTIITTKPMTQSHTTSNDTSAKQVVRTLSGITQGKPVVTGDAPQTKKFDPVADQDNRLMQMLELSLAIKDKKSEYDDLRKSFTNDLKAALDDNEENPKIRHSENERVHVYLSKRRVYKYSDKLTAKRLKLEAQMADLKDEEAKEVRHNKAELTKETFTVSFKG*

Ga0101551_1041471

Ga0101551_10414712

F020710

VTATIARADAADSMMFKVTSDTTFKIFNMDAITDTTANGDGVFISDTASDEGKAAYIVSRVNYLRPAKAVGWNDIQGFIDFASQIGGGDA*

Ga0101551_1046008

Ga0101551_10460081

F077401

MTMKTFWAWKHDINSTHKNMSGYTKILARDMNSAYRKAHKHYKHHMFNSDFNVSVMSGETDKHGYAKEVQYSTGKWTRKAWSTYKYFHSLEPEMQERVHNHYKEFGDDWKGQDKTDLRFLVALLRQEPAND*

Ga0101551_1074360

Ga0101551_10743602

F064809

MLTTTFTGNITFAEIVSQDGQGNNLDNPFLAIKVAVNDVNDNGLTIAVRTKNGLLEAAQNGEDLVGTRVVIAGSIELPSIRSHWVDNDGNLVALKKPQCRVYANTIERLNRKPAPDTVQKELAIK*

Ga0101551_1092027

Ga0101551_10920271

F016820

LMTKKEFSYIVFSSCGDNVQEIHGVYKDLEGAAYGAKAALSTLFPNHGDKAEIIRCEIISTEEARVTYEKTKPKDIFEKCEDGFCPMPTPQTQEVS*

Ga0101551_1104859

Ga0101551_11048591

F004325

PIGSPQLIGIGGTDVQSQLAAGNRDEYANIRMKQGDTRVVEGAKMPSDLDASYLKLNLPGSPLPANGLLVPQNLRAAERNQDMIGVSEQMFLAKYLPAAGLTQLPVGQPPLESKKGKK*

Ga0101551_1106489

Ga0101551_11064891

F051267

AICWINYTNAQAIFTYANHEQEMAETEFRLDDSADESEVISKLIKSYFDMDNAEDREMISDIVKVSFCFSDTEYPQKLKKKEAEKFWALPTMKAFLERNGKYYFDEEQRDDVETSIKELLDCWKEEIV*

Ga0101551_1114279

Ga0101551_11142791

F053343

LSLGGYNEYIKRNLSLHSNHHSIMNPQAHRSTEELKTIVKALSKLSLLNTPEEDQRLFECEQELRKRKKEQDFIDAHFQVITF*

Ga0101551_1128691

Ga0101551_11286911

F085224

MFPYSVFSGMMLELLEMGAPMFYPSKSLLKRWDEQYGIMTQRTSAEGKRNAGGFSNVAYGKDSAPDPNDSVNQDALHYWLEKSEWYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRDERWAEIRRDLTKTNSSGV*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007115: Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble', st44is

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences