3300007110: Marine sponge Cinachyra sp. associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - cg27is

Overview

Basic Information

• IMG/M Taxon OID: 3300007110
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124748 | Ga0101641
• Sample Name: Marine sponge Cinachyra sp. associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - cg27is
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 109014923
• Sequencing Scaffolds: 12
• Novel Protein Genes: 13
• Associated Families: 3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Predicted Viral	2
Not Available	9
All Organisms → Viruses → unclassified viruses → Virus sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Cinachyra Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Upa-Upasina ?bubble? site, Papua New Guinea
• Coordinates
  • Lat. (^o): -9.8241
  • Long. (^o): 150.825833
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F017146	Metagenome / Metatranscriptome	242	Y
F065466	Metagenome	127	Y
F090258	Metagenome / Metatranscriptome	108	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0101641_1003780	All Organisms → Viruses → Predicted Viral	1854
Ga0101641_1005452	Not Available	1561
Ga0101641_1014628	All Organisms → Viruses → Predicted Viral	1032
Ga0101641_1017233	All Organisms → Viruses → unclassified viruses → Virus sp.	964
Ga0101641_1017714	Not Available	953
Ga0101641_1037661	Not Available	694
Ga0101641_1039508	Not Available	679
Ga0101641_1046226	Not Available	633
Ga0101641_1051621	Not Available	601
Ga0101641_1062285	Not Available	549
Ga0101641_1073936	Not Available	502
Ga0101641_1074115	Not Available	502

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0101641_1003780	Ga0101641_10037801	F065466	MYIFTCVCKIHYLPPGTTMKATVMSMLLCLLSALVEVHSQTVPYVSFMDTNLTNHSYVDLTLVGNLQNGSDSVHCHTDLVTCCNIDAGPHRGDWYFPNGMRLDFNVNTSDIYEVRLEQQVDIRRRNNGDASGIYCCTIETNAVHNYSGYETVYVGLYFSGGECTHVHMIPSILFRSRFSVV*
Ga0101641_1005329	Ga0101641_10053292	F065466	VSFMGTNLPNHSYVDLTLVGSAEDGGDSVQCHTDLSTCCSASQGVHRGDWYFPSGNRLRFILQSGDIYEQRDAQRVDLRRRNNNETSGIYRCDIETNAVNNASGHETVYVGLYASGGEHIHACGSFMGRENGATHYFPCTVHIK*
Ga0101641_1005452	Ga0101641_10054521	F065466	ALVEVHSQTVPYVSFMGTNLPNHSYVDLTLVGRAEDGSDSVQCHTDLQACCSGAQGAHRGDWYFPNGDRLMFSNGPGNIYESREAQRVDLLRRNNGDTSGIYRCTIETSSVRSDNGSKTPKTVYAGLYASGGECTHMCKHFTHQKP*
Ga0101641_1014628	Ga0101641_10146281	F065466	VMSVLLCLLSALVEVHSQTVPYVSFMDTTLSNHSYVNLTLVGNASEGRDSVQCHTDLLTCCSGPQGAHRGDWYFPNGNRLNFLRDLVDIYQSRQAQRVALHRKNNGDTSGIYRCTVETNAVHSGHVFDITTRETVYAGLYASGGECTHMCI*
Ga0101641_1017233	Ga0101641_10172331	F017146	LGGQPSGMRITRKMKSQARTILNMTGGNLSAASEILGIDEQTLVMILLKRFRNDGPVVTKAALRKTKQTVRRLKSMCDMYDDLRPRATARRRSPMKRATTTTLIKN*
Ga0101641_1017714	Ga0101641_10177142	F065466	TMRATVMSVLLCLLSALVEVHSQTVPYVSFMGTNLPNHSYVDLTLVGTPDSDSVQCHTDLSTCCSNTEGADRGDWYFLNGDRLLFGSDPGDIYEHRDAQQVDLRRRNNGDTSGVYCCTIETNAVHSDDSSDTTTRDCLCGTVCQWR*
Ga0101641_1037661	Ga0101641_10376612	F065466	MVTGPIYVYSSPGAFVSFMGTNLPNHSYVDLTLVGSAVDGSDSVHCHTDLVTCCSSVQGVDRGDWYFPNTMRLNFLGDPGDIHEWRGPQLVDLRRKNNSDTSGIYCCTIETNAVHSDDIIDITTRETVYAGLYASGGECAHGEEFQ*
Ga0101641_1039508	Ga0101641_10395082	F065466	KAAASLLLCLLSALAEVHSQTVPYVSFMGTNLPNHTYVNLTLVGDAGGSDSVQCHTDLNTCCSNAQGADRGDWYFPNEVRLQFSIDPGDIYEQRGASRVDLRRRNNGDISGIYCCTIETNAVNDEDGRETVYVGLYASGGQSLPRIM*
Ga0101641_1046226	Ga0101641_10462262	F090258	MKKFNKMESNLICDALDYYVIHLEAEIKALAENGKRSIFAPGFYPMIKDELVNKIKQDMTKKQRV*
Ga0101641_1051621	Ga0101641_10516212	F065466	MSVLLCLLSALVKVHSQTVPYVSFMGTNLPNHSYVDLTVVGRAEDGSDSVQCHTDLSTCCSGHQGADRGDWYFPSGTRLPFQGDIYERRTAQRVDLHRRNNGDTSGIYHCTIETNAVHSDNDSDTTIRETVYAGLYASGGECAHGEEFEHSL*
Ga0101641_1062285	Ga0101641_10622851	F065466	LSTLVEVHSQPVPYVSFMGTNLPNHSYVNLTLVGEAEDGSVQCHTDLGSCCSSAQGADRGDWYFPNGDRLQFSGDIYEFRQAQRVDLYRRNNGAISGVYRCDIETDAINDDDGQETVYVGLYGSGGEYISENWGDPAF*
Ga0101641_1073936	Ga0101641_10739361	F065466	TMRATVMSVLLCLLSALVEVHSQTGPYVSFMGTNLPNHSYMDLTLVGSVAGVSVQCHTDLDSCCGGAQDSDRGDWYFPNGDRLPFAAEPGDIYQTRGAQRVDLRHGNNGVTSGIYRCDIETNAVNDNDGRETVYVGLYVSGGQSLPRIV*
Ga0101641_1074115	Ga0101641_10741151	F065466	CLSPGTTMKATVMSVLLCLLSALVEVNSQTVPYISFMGTNLPNHSYVDLTLVGYALDGSNSVQCHTDLNTCCTHAQGDDRGDWYLPDGKRLNYAGDPGNIYQHRVAQQIFLYRRNNGVTSGIYCCTVETNAVHSDSGSDTTTRETVYAGVYASGGECTHMRI*