3300007082: Marine sponge Cinachyra sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', cg10ic

Overview

Basic Information

• IMG/M Taxon OID: 3300007082
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124806 | Ga0101642
• Sample Name: Marine sponge Cinachyra sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', cg10ic
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 94869861
• Sequencing Scaffolds: 4
• Novel Protein Genes: 5
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	4

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Cinachyra Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Upa-Upasina 'control' site, Papua New Guinea
• Coordinates
  • Lat. (^o): -9.828217
  • Long. (^o): 150.820517
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F065466	Metagenome	127	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0101642_1023079	Not Available	796
Ga0101642_1040117	Not Available	589
Ga0101642_1041368	Not Available	579
Ga0101642_1051913	Not Available	509

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0101642_1023079	Ga0101642_10230792	F065466	MVHCLSPGATMRATVMSVLLCLLSAVVEVHSQTVPYVSFMGANLTNHSYVDLTLVGRPEDGGDSVQCHTDLNTCCSGAQDACRGDWYFPNGSKLQFSKNPGDIYEHHEAQRIDLHRRNNGDTSGIYRCTVETNAVHSDNNSDTTTRETVYVGLYASGGEINHYCMCIVP*
Ga0101642_1040117	Ga0101642_10401171	F065466	VPYVSFMGANLPNHSYVDLTLVGNGSDSVQCHTDLVTCCSRIQGTDRGDWYFPNGERLKFSMDPGNIYESREAQRVDLRRKNNGDTSGIYRCTIDVVHSENDSKTRETVYAGLYTSRGECTHMCCSRLTHQKHSV*
Ga0101642_1040727	Ga0101642_10407271	F065466	GTNLLNHSYVDLTLVRDALGGSDSVQCHTDLVTCCSSAQGADRGDWYFPNKERLNFSGDPGDIYEQREAQQVELHRRNNGDTSGIYHCTIETNAVHSDNHSDTTTRKTVYAGPH*
Ga0101642_1041368	Ga0101642_10413681	F065466	KLRCYYLVTVNWSWCRMMSVTCPLLLCLLSALVEVHSQIVPYVSFMGTNLTNHSYVNLTLVGNTEGDSVQCYTDLASCCYFGQGADRGDWYFPDGHRLQYADGSGDIYENRMAQRVDLRRRNNGDTSGIHRCTIETNAVRSDDNSDTTTRETVYAGLYASGGE*
Ga0101642_1051913	Ga0101642_10519132	F065466	FVSFMGTNLPNHSYVDLTLVGSAVDGSDSVHCHTDLVTCCSSVQGADRGDWYFPNTMRLNFLGDPGDIHEWRGPQLVDLRRKNNSDTSGIYRCTVETNAVHSDDISDTTTRETVYAGLYASGGECALCTWREI*