3300007060: Marine sponge Cinachyra sp. associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - cg24is

Overview

Basic Information

• IMG/M Taxon OID: 3300007060
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124747 | Ga0101640
• Sample Name: Marine sponge Cinachyra sp. associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - cg24is
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 77188439
• Sequencing Scaffolds: 4
• Novel Protein Genes: 5
• Associated Families: 3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1
All Organisms → cellular organisms → Bacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Cinachyra Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Upa-Upasina 'bubble' site, Papua New Guinea
• Coordinates
  • Lat. (^o): -9.8241
  • Long. (^o): 150.825833
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F030459	Metagenome / Metatranscriptome	185	N
F034602	Metagenome	174	N
F065466	Metagenome	127	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0101640_1016083	Not Available	865
Ga0101640_1037664	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	566
Ga0101640_1038319	Not Available	561
Ga0101640_1041493	All Organisms → cellular organisms → Bacteria	537

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0101640_1016083	Ga0101640_10160831	F065466	MKATVMSVLLCLLSALVEVHSQTVPYVSFMGTNLPNHSYVDLTLVGRAEGGSDSVQCHTDLQACCSGAQGAHRGDWYFPNGDRLMFSNGPGNIYESREAQRVDLLRRNNGDTSGIYRCTIETSSVRSDNGSKTQETVYAGLYASGGECTHMCI*
Ga0101640_1036824	Ga0101640_10368241	F065466	APYVSFMGTNLPNHSYVDLNLVGYALDGGDSVQCHTDLSTCCNATQGADRGDWYFPNGDRLQFSDYPGNIYERRAAQRVDLRRSYNGDTSGIYRCTVETNAVHSDDFSDNTTRETVYAGLYASGGECVHGEEFEYSQ*
Ga0101640_1037664	Ga0101640_10376643	F034602	YDVGMTNRFKEILPPHTKEEKSYPQLISLGIMLLGILIIDIMGYYHGNMTLLEVLKNL*
Ga0101640_1038319	Ga0101640_10383192	F065466	YSSPGAFVSFMGTNLPNHSYVDLTLVGSAVDGSDSVHCHTDLVTCCSSVQGVDRGDWYFPNTMRLNFLGDPGDIHEWRGPQLVDLRRKNNSDTSGIYRCTIETNAVHSDDIIDTTTRETVYAGLYASGGECAHGEEFQ*
Ga0101640_1041493	Ga0101640_10414932	F030459	MVDIIKKRVIDWDNQLRKEKHFNEKFGTNLSPSCVKELTGSFRRLTEKSKNKIGDGTLEQCEEFYLSLDLMKQNQYIHICKNRSAAFYKIGDEPDSDKNNSDYQNDFSEWDEKLNEFKSQNGWDKFSN*