3300007056: Marine sponge C. singaporensis associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - co46is

Overview

Basic Information

• IMG/M Taxon OID: 3300007056
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124751 | Ga0101661
• Sample Name: Marine sponge C. singaporensis associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - co46is
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 69782100
• Sequencing Scaffolds: 9
• Novel Protein Genes: 9
• Associated Families: 5

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	8
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter haemolyticus	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Coelocarteria Singaporensis (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Upa-Upasina 'bubble' site, Papua New Guinea
• Coordinates
  • Lat. (^o): -9.8241
  • Long. (^o): 150.825833
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000999	Metagenome	809	Y
F001806	Metagenome / Metatranscriptome	631	Y
F044550	Metagenome	154	N
F076185	Metagenome	118	N
F085224	Metagenome	111	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0101661_1010848	Not Available	1008
Ga0101661_1015060	Not Available	862
Ga0101661_1016566	Not Available	823
Ga0101661_1022306	Not Available	712
Ga0101661_1024292	Not Available	682
Ga0101661_1027263	Not Available	641
Ga0101661_1031156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter haemolyticus	595
Ga0101661_1036594	Not Available	543
Ga0101661_1039688	Not Available	519

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0101661_1010848	Ga0101661_10108481	F085224	KRLLKRWDESYGMMFHRTNAFGERRAGGFSNIAYGKGAMPDPNDGVNPDALHYWLDKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTA*
Ga0101661_1015060	Ga0101661_10150601	F044550	LHIGAYVMTKRLMRVRKLYSLILDEDAKYCLLKLDTDSKDYVELDHDLDLFALTRLLFQQDNDHYHKIPNKKE*
Ga0101661_1016566	Ga0101661_10165662	F000999	MNIEDLTKEVERIEAKSDFVVSWWAKKYKKTIRRIGNLNKEGCRVWEQGGKKYMCFWDVVIERYTTCIDPVITYKKGLN*
Ga0101661_1022306	Ga0101661_10223061	F085224	FSVTMLELLQMGVPMYYPSKSLLKRWDERYGMMWHRTNSFRQRRAGGFSNIAYGKGSMPDPNDSVNRDALHYWLEKAEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDARWAEIRRDLAKSNSTPA*
Ga0101661_1024292	Ga0101661_10242922	F085224	YGMMFHRTSKHGQRSAGGFSNIAYGADSAPDPNDSVNPDALHYWLDKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIWDARWAEIRRDLAKSNSTPA*
Ga0101661_1027263	Ga0101661_10272631	F085224	YRDLLRFKAIVMFPYSVWSGVMVELLQMGVPMFYPSKSLLKRWDESYGMMFHRTNAFGERRAGGFSNVAYGKGSAPDPNDSVNREALHYWLEKSEWYNWDVRYFDSPADLHEKLKAADFEAMHRDVLKTRARMDKIRNERWAEIKRDLTKTA*
Ga0101661_1031156	Ga0101661_10311561	F001806	MDAGTRQKRVEGLEAIKNKALSMAEEGVDSLEVRDFVTAAKKELAYELPDEDAFQKAARAVIAYRRKQGE*
Ga0101661_1036594	Ga0101661_10365942	F076185	NRSGKAFNTTNRMIAMVNKLFNKAPTVLDDIKFGIVNKPLSEFTNVFEAGLLQAGDYINGELLDAAANTSNMDAGTYNPETAQDTVVDAGLYINV*
Ga0101661_1039688	Ga0101661_10396881	F085224	YLRPYRRLITRTLNGFSYQVLWRFKAIGMFPYSIWSGVMLELLEMGVPVFYPSKILLKRWRERYEMVYQRSSGGRRSAGGFSNIAYGKDSAPDPNDGVNREASHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLAKTSSTPA*