3300007053: Marine sponge C. singaporensis associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - co35is

Overview

Basic Information

• IMG/M Taxon OID: 3300007053
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124750 | Ga0101535
• Sample Name: Marine sponge C. singaporensis associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - co35is
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 70141868
• Sequencing Scaffolds: 10
• Novel Protein Genes: 10
• Associated Families: 4

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	9
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Coelocarteria Singaporensis → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Upa-Upasina 'bubble' site, Papua New Guinea
• Coordinates
  • Lat. (^o): -9.8241
  • Long. (^o): 150.825833
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000999	Metagenome	809	Y
F027869	Metagenome	193	Y
F085224	Metagenome	111	N
F101313	Metagenome / Metatranscriptome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0101535_1005576	Not Available	1678
Ga0101535_1008988	Not Available	1222
Ga0101535_1024910	Not Available	620
Ga0101535_1025859	Not Available	605
Ga0101535_1027217	Not Available	585
Ga0101535_1030295	Not Available	546
Ga0101535_1030647	Not Available	543
Ga0101535_1030719	Not Available	542
Ga0101535_1032968	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	520
Ga0101535_1033254	Not Available	517

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0101535_1005576	Ga0101535_10055761	F085224	MFPYSIYSVTMLELLELGVPMFYPSKSLLKRWDGRYGMMWHRTDYYGQRKAGGFSNIAYGADSAPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLRTRARMDKIRDERWAEIKRDLTKTSSTPA*
Ga0101535_1008988	Ga0101535_10089882	F085224	KILLKRWHERYEMVYQRSSGGRRSAGGFSNIAYGADSAPDPNDGVNREALHYWLDKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTSSTPA*
Ga0101535_1024910	Ga0101535_10249103	F000999	MNLEDLTKEVERIEAKSDFVVSWWAKKYKKTIRRIGNLNKEGCRVWEQGGKKYMCFWDVVIERYTTCIDPVITYKKGLN*
Ga0101535_1025859	Ga0101535_10258591	F085224	RFKAIVMFPYSIYSVTMLELLELGVPMFYPSKSLLKRWDGRYGMMWHRTDYYGQRKAGGFSNIAYGADSAPDPNDSVNQDALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTSSTPA*
Ga0101535_1027217	Ga0101535_10272171	F085224	RAYLSVYRHRIRRALNGFSYRDLLRFKAIVMFPYSIWSGVMLELIEMGVPMFYPSKSLLKRWDEQYGIMFHRTHEFGSGRSAGGFSNIAYGADSAPDPNDSVNREALHYWLDKAEFYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRNERWAEIRRDLTKSNSTPA*
Ga0101535_1030295	Ga0101535_10302951	F085224	LRFKAIVMFPYSIWSGVMLELIEMGVPMFYPSKSLLKRWDEQYGMMFHRTHEFGSGRSAGGFSNIAYGADSAPDPNDSVNHEALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKSNSTPA*
Ga0101535_1030647	Ga0101535_10306471	F085224	LLEMGVPVFYPSKILLKRWHERYEMVYQRSSGERRSAGGFSNIAYGKDSAPDPNDSVNREALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLRTRARVDKIRDERWAEIRRDLTKTSSTPA*
Ga0101535_1030719	Ga0101535_10307191	F101313	MTSALKREFKVGDEVCHTNKFSTGNNFQRKRKGVVLGIERRPVKDGKLRTYIEVLWNTSSVPCFHASHALLHLSEREGKQEEAFHVTHVTELHNFNEHGL*
Ga0101535_1032968	Ga0101535_10329682	F027869	MEHAKAKKAKGKAEKALAQMMMEAEMVKASEADLQPEDGYINPMGRIGVVRQTTYSLTNQFDGNTTQSVINPET*
Ga0101535_1033254	Ga0101535_10332541	F085224	FPYSIYSVTMLELLELGVPMFYPSKSLLKRWDGRYGMMWHRTDYYGQRKAGGFSNIAYGKDSAPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTSSTPA*