3300007046: Marine sponge C. singaporensis associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - co52is

Overview

Basic Information

• IMG/M Taxon OID: 3300007046
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124752 | Ga0101662
• Sample Name: Marine sponge C. singaporensis associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - co52is
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 58988803
• Sequencing Scaffolds: 12
• Novel Protein Genes: 12
• Associated Families: 2

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1
Not Available	9
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Clitellata → Hirudinea → Rhynchobdellida → Glossiphoniidae → Helobdella → Helobdella robusta	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Coelocarteria Singaporensis (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Upa-Upasina ?bubble? site, Papua New Guinea
• Coordinates
  • Lat. (^o): -9.8241
  • Long. (^o): 150.825833
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F041143	Metagenome / Metatranscriptome	160	N
F085224	Metagenome	111	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0101662_107301	All Organisms → cellular organisms → Bacteria	1107
Ga0101662_109963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	957
Ga0101662_113791	Not Available	818
Ga0101662_116697	Not Available	747
Ga0101662_117659	Not Available	727
Ga0101662_120732	Not Available	672
Ga0101662_124143	Not Available	622
Ga0101662_124371	Not Available	618
Ga0101662_124385	Not Available	618
Ga0101662_128896	Not Available	564
Ga0101662_129619	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Clitellata → Hirudinea → Rhynchobdellida → Glossiphoniidae → Helobdella → Helobdella robusta	557
Ga0101662_135508	Not Available	504

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0101662_107301	Ga0101662_1073011	F085224	LLRFKAIVMFPYSVWSGVMVELLQMGVPMFYPSKSLLKRWDESYGMMFHRTNAFGERRAGGFSNVAYGKGSAPDPNDSVNREALHYWLEKSEWYNWDVRYFDSPADLHEKLKAADFEAMHRDVLKTRARMDKIRNERWAEIKRDLTKTA*
Ga0101662_109963	Ga0101662_1099632	F041143	MIDNPRISGIDWQGLQKGDLVPHHQVKEFFHSIFPDKEWDDFSMVKVIDKLMKLRETINRPLIIKEVYKDQSLRVLTDKESVDYSAQQANAGIKKHRRHTRRLFTHINKDNLDPAKQRELETKQIHHAFIASAADGARKESLQLQRKGERVPKSLIEKSDFKKSS*
Ga0101662_113791	Ga0101662_1137911	F085224	GFSYQDLLRFKAIVMFPYSVFSGMMLELLEMGAPMFYPSKSLLKRWDEQYGIMTQRTSAEGKRSAGGFSNVAYGKDSAPDPNDSVNRDALHYWLEKAEWYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLSKSAAT*
Ga0101662_116697	Ga0101662_1166972	F085224	DYGYRFLRIRRALQGFSYQDLTRFKAIVMFPYSTFSVVMLELIEMGVPMFYPSKRLLKRWDESYGMMFHRTNAFGERRAGGFSNIAYGADSAPDPNDSVNQDALHYWLDKAEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDARWAEIRRDLTKTNSTGV*
Ga0101662_117659	Ga0101662_1176591	F085224	FKAVVMFPYSVFSGMMLELIQMGVPMFYPSKSLLKRWDEKYGMMFHRTNAFGERRAGGFSNIAYGANSAPDPNDSVNQEALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDARWAEIRRDLTKTSSTPA*
Ga0101662_120732	Ga0101662_1207321	F085224	IKHPRPYLNYYRVRIRAALNGFSYQDLLRFKAIVMFPYSAFSGIMLELLEMGVPMFYPSKRLLKRWDESYGMMFQRTSGYGRRSAGGFSNIAYGKDLMPDPNDSVNREALHYWLDKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDKRWAEIKRDLTKTA*
Ga0101662_124143	Ga0101662_1241432	F085224	MMFHRTHQFGQWRSAGGFSNIAYGADSAPDPNDSVNPDALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRNERWAEIKRDLTKTSSTPA*
Ga0101662_124371	Ga0101662_1243712	F085224	DIRRARAYFSHHRHTIRRAFQAFSYRDLLRFKAVVMFPYSVWSGVMVELLQMGVPMFYPSKRLLKRWDESYGMMFHRTSAFGERRAGGLSNIAYGKSAMPDPNDGVNREALHYWLDKSEWYNWDVRYFDSPADLHEQLKAADFEAMHRDVLRTRARMDKIRDERWAEIKRDLTKTA*
Ga0101662_124385	Ga0101662_1243851	F085224	QMGVPMFYPSKRLLKRWDESYGMMFHRTNAFGARRAGGLSNIAYGKGAMPDPNDGVNREALHYWLEKSEFYNWDVRYFDSPADLHEKLKAADFEAMHRDVLKTRARMDKIRDERWAEIQRDLTKTA*
Ga0101662_128896	Ga0101662_1288962	F085224	RFKAIVMFPYSAFSGIMLELIEMGVPMFYPSKRLLKRWDERHGMMFQRTGDLAQRSAGGFSNVAHGKDLMPDPNDSVNPEALHYWLEKSEWYNWDVRYFESPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTA*
Ga0101662_129619	Ga0101662_1296191	F085224	RAALNGFSYQDLLRFKAIVMFPYSAFSGIMLELIEMGVPMFYPSKRLLKRWDEIYGMMFQRTSGYGRRSSGGFSNIAYGKDLMPDPNDGVNREALHYWLEKSEWYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTSSTPA*
Ga0101662_135508	Ga0101662_1355081	F085224	LLRFKAIVMFPYSVWSGVMVELLQMGVPMFYPSKSLLKRWDESYGMMFHRTNAFGERRAGGFSNIAYGKGSAPDPNDGVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTA*