NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300006982

3300006982: Non-marine hypersaline water viral communities from A?ana, Logro?o, Spain -Vir_A?ana_Surgencia_PRE



Overview

Basic Information
IMG/M Taxon OID3300006982 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0117923 | Gp0125728 | Ga0102674
Sample NameNon-marine hypersaline water viral communities from A?ana, Logro?o, Spain -Vir_A?ana_Surgencia_PRE
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of Alicante
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size21443807
Sequencing Scaffolds3
Novel Protein Genes3
Associated Families3

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Shortaselviridae → unclassified Shortaselviridae → environmental Halophage eHP-281
Not Available1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameNon-Marine Hypersaline Water Viral Communities From Salinas De Anana, Spain
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Hypersaline Water → Non-Marine Hypersaline Water Viral Communities From Salinas De Anana, Spain

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Hypersaline (saline)

Location Information
LocationA?ana, ?lva, Pais Vasco, Spain
CoordinatesLat. (o)42.80111387Long. (o)-2.985507Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F027696Metagenome194N
F066493Metagenome126Y
F079661Metagenome115Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0102674_101795All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales1449Open in IMG/M
Ga0102674_103234All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Shortaselviridae → unclassified Shortaselviridae → environmental Halophage eHP-281054Open in IMG/M
Ga0102674_103669Not Available982Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0102674_101795Ga0102674_1017953F027696MSTTQLNTVAANLDISEHDGERVIDFDIAANTDYEIQSCVMVDENDRVVEAAVRFGRVEERPELGIGKPILASAWANMVSETTDAEAVEGDLSDFSHIVPHLRVHRENVEEYGLETLSLDEFASVVAELADLTENVLRGDDSTIENEIDAYL*
Ga0102674_103234Ga0102674_1032343F079661VSGVHDYMSDTTIQIPTDLRNRLKDERLPHESNYGDTIRRLLGDTGGQLWTEQEIRDVARKEIESFSRHRQ*
Ga0102674_103669Ga0102674_1036692F066493MTETRTREFDSGVVDVADELVQQHGPRGAIERLQQRRQTASDELAARCNEALAWIRREVIDGEGTDG*

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