3300006915: Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius crassitunicatus.1

Overview

Basic Information

• IMG/M Taxon OID: 3300006915
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0095504 | Gp0102451 | Ga0056106
• Sample Name: Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius crassitunicatus.1
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 47051381
• Sequencing Scaffolds: 6
• Novel Protein Genes: 8
• Associated Families: 8

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota	2
Not Available	4

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Marine Gutless Worms Symbiont Microbial Communities From Various Locations
• Type: Host-Associated
• Taxonomy: Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont → Marine Gutless Worms Symbiont Microbial Communities From Various Locations

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut

Location Information

• Location: Max Planck institute for Marine Microbiology, Germany
• Coordinates
  • Lat. (^o): 51.321602
  • Long. (^o): 12.394572
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000084	Metagenome	2468	Y
F001144	Metagenome	765	Y
F017605	Metagenome	239	Y
F041287	Metagenome / Metatranscriptome	160	Y
F042907	Metagenome / Metatranscriptome	157	Y
F064438	Metagenome	128	Y
F085256	Metagenome	111	Y
F088366	Metagenome	109	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0056106_100788	All Organisms → cellular organisms → Eukaryota	4264
Ga0056106_101842	Not Available	2264
Ga0056106_104057	Not Available	1369
Ga0056106_104955	Not Available	1200
Ga0056106_108670	All Organisms → cellular organisms → Eukaryota	808
Ga0056106_111640	Not Available	655

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0056106_100788	Ga0056106_1007883	F085256	MQAAKKLVLVDPQFLEQLKVDREYKQIQKPTETVAKTNLSLDIGKTLHNQSLSDDQKVKQYLQTLNRYLHVGREFPETLDVKPNPLSEVAVKRKKAQKNQRRRKTWVQY*
Ga0056106_101842	Ga0056106_1018421	F041287	MEVCHKCGNPADYICPHCATKSCRIHMALRYLGPYRGFKSRYMCPKCWKTKQVMLNQNMINARRYKPKKYVFYKVPIIGR*
Ga0056106_104057	Ga0056106_1040572	F088366	MTVMFEVLYCVDTDTVTVMLCDSFIFGSLAIWVTDDIEC*
Ga0056106_104955	Ga0056106_1049552	F042907	MENQPIDVIEIDQYNDLRDKPCILCGEPYNHVLGSYSPEETKRSKNNNDKSPVLYYTLCEHCFNNGHIPTARIVDAYRRKFGKVAALVAV*
Ga0056106_106586	Ga0056106_1065862	F000084	LILRKIIKIVATRCHILKLKCTKFDFGWGSAPDPAGGAYSAPPDPLAGFWGRFAAGKGE
Ga0056106_108670	Ga0056106_1086702	F064438	MKTFIVSYGSEWHEMNRVCEVDMTGRMLKAFGSSPGEGVGQLNAPWHVSLDDEERIIVADYLNDRVLLLNKQLMLQRVLVTWDQRPLSDVVGAPARLHYDSHSGRLLVGLERGHLDIYQLCT*
Ga0056106_111640	Ga0056106_1116401	F001144	MSTDSVLYDLTKSTSLQANMTDDSCRLEFIEIVPLTRDDDAPCETDCDSGYWPPESKQENLPVMKQEPENVCYVIFY*
Ga0056106_117630	Ga0056106_1176301	F017605	MHANLLTHNSSKTEFLLIGLKKQLLKVNSHALNTSHSARNLG