3300006889: Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius crassitunicatus.2

Overview

Basic Information

• IMG/M Taxon OID: 3300006889
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0095504 | Gp0102452 | Ga0056107
• Sample Name: Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius crassitunicatus.2
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 35580696
• Sequencing Scaffolds: 4
• Novel Protein Genes: 5
• Associated Families: 5

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
Not Available	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Marine Gutless Worms Symbiont Microbial Communities From Various Locations
• Type: Host-Associated
• Taxonomy: Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont → Marine Gutless Worms Symbiont Microbial Communities From Various Locations

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut

Location Information

• Location: Max Planck institute for Marine Microbiology, Germany
• Coordinates
  • Lat. (^o): 51.321602
  • Long. (^o): 12.394572
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001344	Metagenome	718	Y
F003519	Metagenome	481	Y
F027119	Metagenome	195	Y
F085256	Metagenome	111	Y
F104759	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0056107_101104	All Organisms → cellular organisms → Eukaryota	3045
Ga0056107_102939	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1253
Ga0056107_106845	Not Available	675
Ga0056107_106889	Not Available	672

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0056107_101104	Ga0056107_1011043	F085256	MQAAKKLVLVDPQFLQQFQKDREYKQIQKPADALARANLSLDIGKTLDDDTLADDRKVKNYLQTLNRYFQLTDEVPSSFTSKSNPLSEVKVKVKGKQKKRKRLPWLRY*
Ga0056107_102939	Ga0056107_1029391	F003519	MLETYQKIHPKPTTIAELKEALQMIWDSLPQRPINKVVKNLPKRMKVCVKAESGHFEHSQ
Ga0056107_106845	Ga0056107_1068452	F001344	VGAAAQDAARKKVDKYANLAETHLFYPFAIETGGAWHDLAIELVQEIGRRTTIVTEETRETTFLFQRLSIALQRGNAVAFLNTMIAE*
Ga0056107_106889	Ga0056107_1068892	F104759	LGSILLATGIVFSTILFAYSLYRGAADAATVLGIINMLLISGGGLLGIGVFEKGINIERRCSKD*
Ga0056107_108522	Ga0056107_1085222	F027119	MWNSLPNWVVSANTTDTFKSRIDKFWQNQDIVHNFRAQLQGTGSRSVLDN*