3300006647: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_4R (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300006647
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123890 | Ga0099772
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_4R (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 114456697
• Sequencing Scaffolds: 14
• Novel Protein Genes: 14
• Associated Families: 11

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	9
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas hengshuiensis	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Klosterneuburg, Austria
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000344	Metagenome / Metatranscriptome	1257	Y
F010686	Metagenome / Metatranscriptome	300	Y
F017318	Metagenome / Metatranscriptome	241	Y
F025291	Metagenome / Metatranscriptome	202	N
F033443	Metagenome / Metatranscriptome	177	Y
F037756	Metagenome / Metatranscriptome	167	Y
F051952	Metatranscriptome	143	N
F070166	Metatranscriptome	123	N
F071145	Metagenome / Metatranscriptome	122	Y
F076161	Metagenome / Metatranscriptome	118	N
F105419	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0099772_1000313	Not Available	614
Ga0099772_1000983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1	979
Ga0099772_1023653	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1086
Ga0099772_1025136	Not Available	950
Ga0099772_1025457	Not Available	967
Ga0099772_1048080	Not Available	673
Ga0099772_1051301	Not Available	546
Ga0099772_1337106	Not Available	757
Ga0099772_1347737	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	633
Ga0099772_1350180	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1012
Ga0099772_1365184	Not Available	1175
Ga0099772_1367968	Not Available	797
Ga0099772_1371013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas hengshuiensis	607
Ga0099772_1374020	Not Available	817

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099772_1000313	Ga0099772_10003131	F037756	ALFPVPTLGAHLAVAAGFPTPFSAANGVSGLVAGPSNLSRG*
Ga0099772_1000983	Ga0099772_10009831	F076161	SNVSRRIRLTPRNRRAEAHRFLKSINFSSRYPKTGFRTFAEKPVVKSLLLPQFGGQKMPPQGASIPNRLTAWTVPQIATDPKERNNLLSSPTNPDAPTGKPI*
Ga0099772_1023653	Ga0099772_10236532	F010686	VLDSCGQAIKGTWGMSWRQEALKGVEDCDKPGGTVKRVLILGFPNCLTLNP*
Ga0099772_1025136	Ga0099772_10251362	F017318	MGIPLLAAPLKFERTVEGLFDITCDGINPSVGLFNFSLSDLPSNSDFTNLFDMYRIDKIECAWYPEYTVLSDSGLVSNAVDVQVNTAIAQISNTPTVVSDVLQYKTCVGTGITQIHKRSFQPSYLMDGICPCSCFLSCNNATANWYGVAYGVAPTGTAMLFKSRAKFFMSFVQSR*
Ga0099772_1025457	Ga0099772_10254571	F070166	ELAALFHNQLWLQVKCETDVHFKEKFGGTLEALAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEINKLPPKSFIGKGYRDHGTAPSPEIDGTPSWQEVGSEFSNLEREHTEAFLFLLKVIDNDPNVSIQERLQGLKRAIEVTERIKRIHPNWRNSQITEASKGRIIDAKKVKKVIP*
Ga0099772_1048080	Ga0099772_10480802	F000344	MRPRHPHAAESGVGKHTARESERVQACAAGKERVTNAHPHKLAS
Ga0099772_1051301	Ga0099772_10513011	F051952	PDHFTSTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGTEVFTFRAVFTSLEDVVSANPQDRLTRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTS
Ga0099772_1337106	Ga0099772_13371062	F025291	PNQRRKQVTNGKTKHHMVNLQREINIFRESAWRVITYNYHLGDHSSTGLYTLNVGADQRYMSFQTLLTTDEFQNMSIVYNEFKIHKAVFTSLPTTNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSARIFAPKATTAQSCEWNLKGLGPNFGIWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK*
Ga0099772_1347737	Ga0099772_13477371	F033443	SKYQLLYELKNLYSVLNSKNQGELYRQPINVLLQTINLDTDEDRMSKVLNELAIYDWVPEIKLFVYNLTKSPEQRSNLLSGGKSEVVYTIVEQVEDGHLAYIKDSWFLLTDDSIEKTLLENHVKDDNRMKTLRSLQTAMQFATINESRIDFRISEYLTIGLSVNDSTIFINEDELSEDTSLENLFSSPIVPIVNRNFYPLLVEVSNNIDS
Ga0099772_1350180	Ga0099772_13501801	F105419	MCKLFALGALMVAAAVSNGCISNTMYGCEITETLAPGASEGEVVMKHGAPDNIVYLGNQYCNPQTGERGEVDKYLYEYRIGGGTTLLGWLFASDEFHNIAYLIEGGRVMGGGYVGEGKGSIILGNNFGVVSTPLGVFDMNFGGFVHPKARAGYGGDGTPERQY*
Ga0099772_1365184	Ga0099772_13651841	F070166	MNIDNYVVQIHRRTKRITLQRFLVSKIAYGKDFSLVELAALFHNQLWLQTKSLTDIHFKEKFGKSLEELAIILKECNFRQGLQPGTIKSVRTRLLTQEWDFLIPQRNLPNLEAQLRNSIYTKWRKPQGVENSKLPPKKHIGKGYRDHGTAPKPEKDGSPSWQEVGSEFSNLEREDTENLLYLMKVVSGEINVGPQNIKEIIQRIKGTIRVNEAIKRIDPNWRNSQVAEASRGRLLPKK*
Ga0099772_1367968	Ga0099772_13679681	F025291	NNNNKHHMVNLRKEINIFRDRAWRVITYNYHLGDHSSTGLYTLNVGADQRYMTFQTLLTTDEFQNMSVVYNEFKIHKAVFTSLPTSNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSARIFAPKHLNAQSCEWNLQGMGPNFNVWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK*
Ga0099772_1371013	Ga0099772_13710131	F071145	MRKLSSIAGAALLAFTAFATPASAQSMSAGGSCGYSAGDYGFTDINSSKTMHAGESTVPALFYSVNYSGVPAPTTVGVIVRYNDELESQNAVAAFTAENSGGTFDGALRANISPEAQGGGNGIDTSFRG
Ga0099772_1374020	Ga0099772_13740201	F070166	LVSKIAYGKDFSLIELAALFHNQLWLQVKCETDVHFKEKFGVSLEEIAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGVEINKLPPKSFIGKGYRDHGTAPSPEKDGSPSWQEVGSEFSNLEREHTENLLFLLKVIDNEPNISNQEKLQGLRRSLEIKARIERIDPNWRNSQITEASKGRIVDAKSIKQVKP*