3300006409: Viral communities from the deep bioline of CORK borehole observatory U136A, on the Juan de Fuca Ridge Flank, Pacific Ocean - passive in situ filtration, Fraction 20

Overview

Basic Information

• IMG/M Taxon OID: 3300006409
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0116231 | Gp0119593 | Ga0078977
• Sample Name: Viral communities from the deep bioline of CORK borehole observatory U136A, on the Juan de Fuca Ridge Flank, Pacific Ocean - passive in situ filtration, Fraction 20
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Hawaii
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 16894439
• Sequencing Scaffolds: 5
• Novel Protein Genes: 7
• Associated Families: 4

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	3
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota → Candidatus Korarchaeota archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Viruses Inhabiting Crustal Fluids Of The Juan De Fuca Ridge Flank
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Viruses Inhabiting Crustal Fluids Of The Juan De Fuca Ridge Flank

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine biome → marine water body → sea water
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline)

Location Information

• Location: Juan de Fuca Ridge Flank, Pacific Ocean
• Coordinates
  • Lat. (^o): 47.750184
  • Long. (^o): -127.740187
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F042912	Metagenome / Metatranscriptome	157	Y
F051940	Metagenome	143	Y
F103293	Metagenome	101	Y
F105221	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0078977_101298	Not Available	1385
Ga0078977_101990	All Organisms → Viruses → Predicted Viral	1100
Ga0078977_103885	Not Available	781
Ga0078977_103958	Not Available	776
Ga0078977_106242	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota → Candidatus Korarchaeota archaeon	605

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0078977_101298	Ga0078977_1012983	F042912	MIYDYLDTIIALILVIGCFILLGLGIDTEVKSIITMAAGWAFGSQYQARKVRKR*
Ga0078977_101990	Ga0078977_1019902	F105221	MAVTLYYKGFDHTNSSDVEEEVTTITSTEAEPKLIKRVVVVQRLANDTNLYVYLEREKILDAIAIESSPVGNDPWSFPIDFKLPLGQTLTVKLKNQTAGSNGGVVGYIEYEITE*
Ga0078977_103885	Ga0078977_1038851	F051940	VKLLENLIKFLRNDNADVQMIGVVIGILVTLIVAVLVFYNIAGSIDTEDIDAKLTGTPAENATDATLDQAGTFFSIAPIIAIVIVAVVILGYVSRIGGGG*
Ga0078977_103885	Ga0078977_1038852	F051940	MKLLQIIKQLLRGDNANIQMIGGVVAILVTLIVAVLVFYNIAGSIDTEDIDKNFGGENETPAENATEATMDQAGTFFSIAPIIAIVAVAVVILGYVTRIGG*
Ga0078977_103958	Ga0078977_1039581	F051940	MKLLQIIKQLLRDNNGNVQMIGGVVAILVTLIVAVLVFYNIAGSIDTEDIDKNFGGENETPAENATEATMDQAGTFFSIAPIIAIVAVAVVILGYVTRIGG*
Ga0078977_103958	Ga0078977_1039582	F051940	VKLLENLIKFLRNDNADVKMIGVVIGILVTLIVAVLVFYNIAGSIDTEDIDAKLTGTPAENATDATLDQAGTFFSIAPIIAIVIVAVVILGYVSRIGG*
Ga0078977_106242	Ga0078977_1062422	F103293	MINIEKLKMLPPPYEIYEFVPCQPAYFKIVDVEMGRMTITPRFPGAPPRKEILAIRLHVDPKTKPFFPHYWDITPSRLVHQLAAMLLPTFPAEMWLRIHRDIPGPKAHFSVGWVEKPP*