3300006094: Petroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1

Overview

Basic Information

• IMG/M Taxon OID: 3300006094
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0112330 | Gp0107643 | Ga0082037
• Sample Name: Petroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1
• Sequencing Status: Permanent Draft
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 131955512
• Sequencing Scaffolds: 16
• Novel Protein Genes: 19
• Associated Families: 13

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	1
Not Available	2
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → Caldilineales → Caldilineaceae → Caldilinea → Caldilinea aerophila	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	1
All Organisms → cellular organisms → Bacteria	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1
All Organisms → cellular organisms → Archaea → Euryarchaeota	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → unclassified Candidatus Methanofastidiosa → Candidatus Methanofastidiosa archaeon	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	3

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Petroleum Reservoir Microbial Communities From Reconcavo Basin, Brazil, Analyzing Oil Degradation
• Type: Environmental
• Taxonomy: Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Petroleum Reservoir → Petroleum Reservoir Microbial Communities From Reconcavo Basin, Brazil, Analyzing Oil Degradation

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): terrestrial biome → oil reservoir → oil
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline)

Location Information

• Location: Brazil: State of Bahia
• Coordinates
  • Lat. (^o): -12.2
  • Long. (^o): -38.11
  • Alt. (m): N/A
  • Depth (m): 500 to 1000

Associated Families

Family	Category	Number of Sequences	3D Structure?
F025288	Metagenome / Metatranscriptome	202	N
F029922	Metagenome / Metatranscriptome	187	Y
F031475	Metagenome / Metatranscriptome	182	N
F035532	Metagenome / Metatranscriptome	172	N
F038519	Metagenome	165	Y
F039408	Metagenome / Metatranscriptome	164	Y
F043670	Metagenome	156	N
F048287	Metagenome / Metatranscriptome	148	N
F054063	Metagenome / Metatranscriptome	140	N
F055749	Metagenome / Metatranscriptome	138	N
F081499	Metagenome / Metatranscriptome	114	Y
F095523	Metagenome / Metatranscriptome	105	N
F103315	Metagenome / Metatranscriptome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0082037_1000002	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	407884
Ga0082037_1002041	Not Available	7658
Ga0082037_1003212	All Organisms → cellular organisms → Bacteria → Proteobacteria	5093
Ga0082037_1003363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → Caldilineales → Caldilineaceae → Caldilinea → Caldilinea aerophila	4916
Ga0082037_1003523	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	4734
Ga0082037_1005101	All Organisms → cellular organisms → Bacteria	3372
Ga0082037_1006168	All Organisms → cellular organisms → Bacteria	2837
Ga0082037_1007293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → Caldilineales → Caldilineaceae → Caldilinea → Caldilinea aerophila	2440
Ga0082037_1010880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1742
Ga0082037_1013559	All Organisms → cellular organisms → Archaea → Euryarchaeota	1457
Ga0082037_1019529	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → unclassified Candidatus Methanofastidiosa → Candidatus Methanofastidiosa archaeon	1077
Ga0082037_1023481	Not Available	928
Ga0082037_1026117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	852
Ga0082037_1029841	All Organisms → cellular organisms → Bacteria	764
Ga0082037_1033758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	693
Ga0082037_1037870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	631

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0082037_1000002	Ga0082037_100000292	F038519	MQMHVIAYEPSADWAGPYTNQELLKRTLAIIQQVDRTAEVISKETDPWAEQILAGLLPYKIHVDLVDGMPQLPAAVSITWPPAQLEGIQIGSQEFREYFVWAKSEVAALRKLATLNKTPSAAKPAAATEEA*
Ga0082037_1002041	Ga0082037_10020412	F054063	MTMEKKLKFTQVIMNAWLYGVESTANVFFDRPKLFYRKWGTISIRPFIESWGELGMEFEKGLSPYNTVKMFIDALVTAQFFNPDDFEFGGDDKNFIFKALQCPYKSHCNKLIGEQKEIACLRAITLLGALDYNIEGESLKYKYNFEFNENAPCMVTFERFKD*
Ga0082037_1003212	Ga0082037_10032123	F039408	MSTGLIDALVLGEAVLERQMAGIALVQPDLAANFTVLPEVDKGAKAFFTRFYQRRKEIKAAAEPKQAIAIALSCVPTWMDAYRFLGAINDTDTVQAAAEVEQNLTTLRASRKAAAWLEKSDFMRAVANEVQI*
Ga0082037_1003363	Ga0082037_10033636	F031475	MDANTSDGSRDPLCANPQQQREKLTQLDFLTLEAMGTSLEELRELLDEEELQAYFAFLRRHSSDLDSISP*
Ga0082037_1003363	Ga0082037_10033637	F025288	MKNKWIWITLSVILLLGLIAGAGALGYLMGLRNANALALQGDDNTPSPRQQIPGMRDGLIIRRPAAFIGYFFLFPLRLLLGLAVLLLVVWLVVKVAKAAWDGGNHKAKSTEATVSSAGTETIVTEAPASPSEPTNTVGSDQQ*
Ga0082037_1003523	Ga0082037_10035234	F095523	MGVSIPIEYLYITVGLLVVAVIYIINDKNNARLYNPEGPLFVKARKKEIPILRVIDPGTNHARHVLGDKERDDDPVYAKDMWGLHADPAYIEGDASPERHPGGLLIYNISPNVTFPISPRNVLAQQTILRHRHDLPEFADLDFLSDRDLLVLLSSPSDHLPHDAQIFTDNYKPTIVEIDESGQPVEVEMNAADLVDRITAFKKYATTLPVEGGGFAYHEYFRNNPYGHSSQTTQRINYLFQKIADRKSAMADKLWTYGLIAIGLLGAVGVTIYIISLAAG*
Ga0082037_1003523	Ga0082037_10035236	F055749	MNLIIAIAIGILTLIAVFSVIPVVGGSIDNAMPALGADSDWNTTTNPDLPSGASMWSQLGPLLVLAVLALVIGLVIMYFRNAAG*
Ga0082037_1003523	Ga0082037_10035238	F103315	MITVEIYIFLAAVVAAAFVYIFLDLDNRLYGNLFAAAFAGILSGLLALWSFNENTVYITTVPETAITVDHYLNDTLANVTTTYAYQTHIVPIVDPALGYFWMLVMVFMWFLVGYFVLEIMHESRMPDDEEAYE*
Ga0082037_1005101	Ga0082037_10051015	F048287	MIDTLKLMLSEYKVSPESSLRVQPASYEVATGEKVEYPLFRNEAGTFFGSKAYLNTENWNLTLKPLPAGNRGTGAFLQFSVPKNYYGSNYYSVGEEGTRAALKKVEGELEQSGVLTNLEEAELSRIDTFKNIQPEEPFSSYFSLFSLLRARRAQQRGYGTTFLLSNSSQEFCVYDKLQEMKEHGLEISNLPKTMRFEHRALKKEKVKSLYGFSRVGELFHGGYGVVRDKQVESWKSSLFSFSAEDVVVLGSKQLEQEMRVFQEKYGANWFQYFLKSYGAYSLAEFAGKEVVRAALENLNSERTKVWRTMRLLEEAERELLVLKQEEGSSKTLGELYEELREKVVGRN*
Ga0082037_1006168	Ga0082037_10061687	F048287	MIDTLKLMLSDYEVSPESSVRVQPASYEVATGEKVEYPLFRNEAGTFYGSKAYLNTENWNLTLKPLPAGNRGVGAFLQFSVPKNYYGSNYFSVGEAGTRAALKKVEGELVQNGVFTNLEEAELSRIDTFKNIEPEEPFSSYFSLFSLLKARRAQQRGYGTTFLVANSSQEFCVYDKLQEMREHGLETSELPETMRFEHRALKKEKVRTLYGFTRVNELFHGGYEVVKEKQVESWKNSLFSFSAEEVVVLGSKQLEQEMKAFQEKFGSNWFQYFLKSYGAYSLAKFAGKEVVRAALENLNSERTKVWRTMKLLEEAERELLVL
Ga0082037_1007293	Ga0082037_10072931	F031475	MDAKTSDSSQDSLNANPQKQCEKLTQLDFLTLEMMGISLEELRALLDEEELQAYFAFLRRQSSDLDSTSP*
Ga0082037_1010880	Ga0082037_10108803	F081499	VKVFSPENTYVVEQAQVIKNTEGSNEAIVTGEKADTPPGS*
Ga0082037_1013559	Ga0082037_10135591	F054063	MDINVKLKYTSTIMNAWLYGVENTANIFFDKPKLFYRRWGTIAIRPFIESWNDLGMDFQKGLSPYNTAKMFVDALVKAEFFNSADFEMSGDDNNFTFKAINCPYKSHCSRLIEEGKEIACLRAITLLGAMEYNKEGESLKYMYKFEFNKETPCLVSFEKFKD*
Ga0082037_1019529	Ga0082037_10195291	F029922	EELYNFNIIELSEMIMSIEHAIRYTEGYRFLLLCFGNEGSSDKAKMIMKSMEDYLELVKDVYRFKVNEKKKRMAFLKGEFVRG*
Ga0082037_1023481	Ga0082037_10234812	F043670	MDITEFIRGDKNPYLGKFRIDEYNIERNKIIRGSWHKNLITNKLKAALADVLTGDYDANKHVIGKLAIGTGTTTPAAADLSLANQLGALKSYVPNSLHNNTYSNKAEGTYYFDSAESSYYGTWGELGLYTANQTDLLTRSLISPTKTFDNTKTMTVYYVIEF*
Ga0082037_1026117	Ga0082037_10261172	F025288	MKNKWIWITLMVIVIFGLIAGAGALGYQVGLRSANALAPQTDEDRALPRQLMPWLRNAPEDGIIRRPTGFIGYFFLFPLGLLLRLAILVLVVWLVVKVAKAAWNGGNHKPEPAETTVSPAGSETVITEEAKSPSTSPSEAPQGSEK*
Ga0082037_1029841	Ga0082037_10298412	F035532	IFSATTGLSDVKTWTRPTKLSTSLETPEVAIEMIAGSVDSISLSYPNRQIEFYVRFVIFEEQTSSASKIGTIYSGIIDAVRSNPDLKTKSGSATCDYFGTFYGRAISFDLAATERNGVSVNAMKIDVPCLLRDL*
Ga0082037_1033758	Ga0082037_10337581	F031475	MDTNTSDDSKDILGTNLQQQREKLTQLDFLTLEVMGTSLEELSELLDEEELQAYFAFLRRHSSDLDSTSP*
Ga0082037_1037870	Ga0082037_10378701	F025288	KEAPMKNKWIWITLSVILVLGLIAGAGALGYQMGLRNANAIASQADGDKTLPRTLMPGMRNAPNGLIIRRPAGFIGYLFLLPLRVLLGLAVLLLVVWLVVKVAKAAWNSGNHKPKPADATVSSAPTETVITEAPASPSEPTSTPESDQK*