3300006081: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS906_Marker113_DNA

Overview

Basic Information

• IMG/M Taxon OID: 3300006081
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0111355 | Gp0119879 | Ga0081760
• Sample Name: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS906_Marker113_DNA
• Sequencing Status: Permanent Draft
• Sequencing Center: Marine Biological Laboratory
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 249836472
• Sequencing Scaffolds: 11
• Novel Protein Genes: 11
• Associated Families: 11

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	7
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1
All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent → Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine hydrothermal vent biome → marine hydrothermal vent → hydrothermal fluid
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline)

Location Information

• Location: Axial seamount, northeast pacific ocean
• Coordinates
  • Lat. (^o): 45.92274
  • Long. (^o): -129.988104
  • Alt. (m): N/A
  • Depth (m): 1522

Associated Families

Family	Category	Number of Sequences	3D Structure?
F012626	Metagenome	279	Y
F013312	Metagenome	272	Y
F013358	Metagenome / Metatranscriptome	272	N
F029246	Metagenome / Metatranscriptome	189	Y
F029782	Metagenome / Metatranscriptome	187	Y
F032676	Metagenome / Metatranscriptome	179	Y
F033215	Metagenome / Metatranscriptome	178	Y
F034217	Metagenome	175	N
F059064	Metagenome / Metatranscriptome	134	Y
F061920	Metagenome / Metatranscriptome	131	Y
F100426	Metagenome	102	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0081760_1060942	Not Available	661
Ga0081760_1066547	Not Available	674
Ga0081760_1105731	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	701
Ga0081760_1110447	Not Available	1203
Ga0081760_1118824	All Organisms → cellular organisms → Bacteria → Proteobacteria	1090
Ga0081760_1154584	Not Available	553
Ga0081760_1175444	Not Available	579
Ga0081760_1235509	Not Available	688
Ga0081760_1301215	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	502
Ga0081760_1307483	Not Available	500
Ga0081760_1380190	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	644

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0081760_1060942	Ga0081760_10609423	F061920	KNGRRFLDKTPFANFIKPEKSDKSCHYEKQESIRDGLTKRLIAEEASRKNAS*
Ga0081760_1066547	Ga0081760_10665471	F033215	LPPRLRVVFEVLNKAPLANVAPPGRLRVPPVEERVPAVTLIPPLRDKSAVPVTIFSPAASRVTGCATLRLDILSSSVKAKLAKSSVPTDREALSSIVEFAANRRVVELSGNTPLKSCTPATSRMPPESVNALAFVVNVVLFVFRVAPVSDKAFCSTNVVSGSEILVPDGALAPETRVIVPPEEFSDALSVNANAPERVRLPAPVSRAIPDKARASFTFR*
Ga0081760_1105731	Ga0081760_11057311	F100426	MAQKRTRIMYASQSVRANGHLLYRVQTLGSNTTFNAEDVFELGALDRVDVVDDVPAVAVALDTNEWGAVNSMAVLAGMNPLQMQGSPTV
Ga0081760_1110447	Ga0081760_11104472	F029782	MLKVLKRLKKQPKSDWKVQEIMLDKFPGGFQRELDWAGGYKRRNIDPRQKHEYKVEVTNE
Ga0081760_1118824	Ga0081760_11188242	F032676	MKKLLFAAIAALLSANAFASIALSGSYTGTLNDSGVYTQDLTTTLVGASADGAVTVTLDKDFAVDDMFVESTIGGIKFKLGEVDDVTSIGASTTIGPITVGANQPSGGAVTFDASGTFAGVTVASTNVTSDARAT
Ga0081760_1154584	Ga0081760_11545841	F013312	TCNLFAVAAVTFTISLSLATKGADNNSDVPLAEIALTLNRLKTALSVSVIVTVIVSAFPESSDTSIDLITAVVAVGTVYKVVADVLVKSTFLFTNVLAIMP*
Ga0081760_1175444	Ga0081760_11754442	F013358	MSIRPKSVCDSCAATYILVHELPEDNYTEQYCPFCGEEHEDIEEDVLLNEDWD*
Ga0081760_1235509	Ga0081760_12355092	F034217	MYTIPVITITTAVMADHAPNATKSNSAMFYLLNGNKINTLEMAELHA*
Ga0081760_1301215	Ga0081760_13012151	F059064	VSAVTSTEAGYLDGVTSAIQTQIDGNTTLTNTKATKAFAIAQAVALG*
Ga0081760_1307483	Ga0081760_13074831	F029246	MGSNLGLIGIGLVALFATSMIKFVAIAAIALGAWKAYQDWGAM*
Ga0081760_1380190	Ga0081760_13801902	F012626	MRIGIDCDGVLRDFIPDLINKIKETHPELAYGIRVPTSWDWEEWLPFWTDEETEKYVFEEHFEELFGPEASVIDTSLEDWPILKA