3300005818: Macropus eugenii forestomach microbial communities from Canberra, Australia - Macropus_eugenii_combined

Overview

Basic Information

• IMG/M Taxon OID: 3300005818
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0056632 | Gp0051321 | Ga0077106
• Sample Name: Macropus eugenii forestomach microbial communities from Canberra, Australia - Macropus_eugenii_combined
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 52808473
• Sequencing Scaffolds: 1
• Novel Protein Genes: 1
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Macropus Eugenii Forestomach Microbial Communities From Canberra, Australia
• Type: Host-Associated
• Taxonomy: Host-Associated → Mammals → Digestive System → Stomach → Unclassified → Macropus Eugenii Forestomach → Macropus Eugenii Forestomach Microbial Communities From Canberra, Australia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut

Location Information

• Location: Canberra
• Coordinates
  • Lat. (^o): -35.310643
  • Long. (^o): 149.124184
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F013656	Metagenome	269	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0077106_147330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	764

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0077106_147330	Ga0077106_1473301	F013656	LGDKMSKIYKEPNKSETETTINVVYNENKLSIYTNKIQLQKQLNKLIGEPTKEYKIKRSIAGSSWDISLDNKVLISRVVLKANVFDL*