3300005791: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS907_Anemone_DNA

Overview

Basic Information

• IMG/M Taxon OID: 3300005791
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0111355 | Gp0119880 | Ga0079402
• Sample Name: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS907_Anemone_DNA
• Sequencing Status: Permanent Draft
• Sequencing Center: Marine Biological Laboratory
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 13538074
• Sequencing Scaffolds: 3
• Novel Protein Genes: 3
• Associated Families: 3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	2
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent → Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine hydrothermal vent biome → marine hydrothermal vent → hydrothermal fluid
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline)

Location Information

• Location: Axial seamount, northeast pacific ocean
• Coordinates
  • Lat. (^o): 45.933231
  • Long. (^o): -130.013645
  • Alt. (m): N/A
  • Depth (m): 1542

Associated Families

Family	Category	Number of Sequences	3D Structure?
F047906	Metagenome / Metatranscriptome	149	N
F050430	Metagenome / Metatranscriptome	145	N
F062154	Metagenome / Metatranscriptome	131	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0079402_11658	Not Available	1526
Ga0079402_15198	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	2272
Ga0079402_16012	Not Available	1000

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0079402_11658	Ga0079402_116581	F050430	MDKKLKENIVVGIKIVGMLFFLIVLITTLVWPGGVD
Ga0079402_15198	Ga0079402_151982	F062154	VGANGVKVLSVVNARPEQPVNSVANGVKVLSVVNARLGRLVNRVVNGVRAPSVVNVRPEQAVSVDRSPVAVVVREDQVVLCGCSL*
Ga0079402_16012	Ga0079402_160122	F047906	VALAAKFTQKRTVTKERTPDAIRVPVAHGPVVGLGVLAVRWHHAVTKVRAALRLNMLVVAKRVSRVEIKFAVTAKAGLVQTQRL