3300004817: Hypersaline lake viral communities from Bras del Port, Santa Pola, Alicante, Spain - SAL2 dirigido Enero 2015

Overview

Basic Information

• IMG/M Taxon OID: 3300004817
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0114557 | Gp0113150 | Ga0070915
• Sample Name: Hypersaline lake viral communities from Bras del Port, Santa Pola, Alicante, Spain - SAL2 dirigido Enero 2015
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Alicante
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 5923250
• Sequencing Scaffolds: 8
• Novel Protein Genes: 10
• Associated Families: 6

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea	1
Not Available	3
All Organisms → Viruses → environmental samples → uncultured virus	4

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Hypersaline Lake Viral Communities From Bras Del Port, Santa Pola, Alicante, Spain
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Lake → Hypersaline Lake Viral Communities From Bras Del Port, Santa Pola, Alicante, Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → hypersaline lake → lake water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Location: Spain
• Coordinates
  • Lat. (^o): 38.19317
  • Long. (^o): -0.59268
  • Alt. (m): N/A
  • Depth (m): 58.6

Associated Families

Family	Category	Number of Sequences	3D Structure?
F054456	Metagenome	140	N
F062297	Metagenome	131	N
F065465	Metagenome	127	N
F072017	Metagenome	121	Y
F076468	Metagenome	118	N
F088354	Metagenome	109	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0070915_100151	All Organisms → cellular organisms → Archaea	1494
Ga0070915_100592	Not Available	868
Ga0070915_101461	All Organisms → Viruses → environmental samples → uncultured virus	607
Ga0070915_101507	All Organisms → Viruses → environmental samples → uncultured virus	599
Ga0070915_101851	All Organisms → Viruses → environmental samples → uncultured virus	544
Ga0070915_101937	All Organisms → Viruses → environmental samples → uncultured virus	530
Ga0070915_102054	Not Available	515
Ga0070915_102130	Not Available	505

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0070915_100151	Ga0070915_1001513	F072017	MSLNQTPSLESQSDTNVKRIVHQHDEIHQLTQEHIDVFDEDDRLLDFYQWQQIIRSSETTVRRLAYAETGVGQ*
Ga0070915_100592	Ga0070915_1005922	F065465	MTEDITVVCECDAKDEARSMGYRRYADMPAADIVAAWPVHYTEHGSWDSHILPTLRCLAGYADRGYGSYQERQDVALIQDGDEADMPADAIILDSGHLLDDIIVSWQDGAHTAVTDTLRQSDSYSLEDIQR*
Ga0070915_101461	Ga0070915_1014612	F088354	MTDTPRAELDVDRFETTTVNANGQVYLGRDLEGTKVHVAVEIVEDADEHEQEDPDE*
Ga0070915_101507	Ga0070915_1015072	F072017	MSLNQTPSLESQGDTNLKSTVHKHDAIHAVTQEHIDVFDEDDRLLDFYEWQQIIRSSETTVRRLAYSEIEEGVDQ*
Ga0070915_101549	Ga0070915_1015491	F076468	MTNLEEIDTKAVWLSGRYWRRESKVVHIDGDCDQLDSCDNPRGPVDPSVLQPDMAVCKRCDPTEPDQYGGSGTSLAHRLRHGDLQDATIDSDSVGGDE*
Ga0070915_101552	Ga0070915_1015522	F076468	MTKLEEIDTKAVWLSGRYWRREHKVVHIDGDCDQLDACDNPRGPVDPDVLAGDMSVCKRCDPNEPDRYGGTTGTSLAHRLRDGDLQDATLDCDTGGDE*
Ga0070915_101851	Ga0070915_1018511	F065465	MSDTITVVCECDAKDEAHSMGYRRYADMAAADIVAAWPLEYASHGSWDSHILPTLRCLSGYADGGYGTYQQRQDIALIQDGDEADMPADAVVLDSGHLLDDMIDAWHSGRHQAITDTLRQSDEHSLEDIQR*
Ga0070915_101937	Ga0070915_1019371	F062297	MSMDDLERCPRRYTVLAERVEDGRVVEQSVTGQSRAEELFARWDEGEQLCNLRVKCISAPMDDVTRHFEHDWPPTNNSPVSSDGGSTESATKGWETR*
Ga0070915_102054	Ga0070915_1020542	F065465	MTEDITVVCECDVLEEARSMGYRRYADMTAADIVAAWPVHYTEHGSWDSHILPTLRCLAGYGDRGYGTYQERQDVALIQDGDEADMPADAIILDSGHLLDDLIDAWHSGRHQAITDTLRQ
Ga0070915_102130	Ga0070915_1021301	F054456	MYEPTLDFETDTEKLTPQQAHDRWEDVTNLDTPELERLEDSRRNELYLDAAEGNQGDDNPPIPGGPLDDAQHLASTPRDEWGPDERAEAEEAINFLSRTMPQFEQSEGEPLIEDEPPKIHKDELSIMRWGVDPKPEDDFL*