3300003658: Hypersaline viral and bacterial communities from Bras del Port, Santa Pola, Spain - HQ1totalprecorrection

Overview

Basic Information

• IMG/M Taxon OID: 3300003658
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0069917 | Gp0108329 | Ga0062184
• Sample Name: Hypersaline viral and bacterial communities from Bras del Port, Santa Pola, Spain - HQ1totalprecorrection
• Sequencing Status: Permanent Draft
• Sequencing Center: Lifesequencing S.L.
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 2979539
• Sequencing Scaffolds: 6
• Novel Protein Genes: 7
• Associated Families: 5

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum halophilum	1
All Organisms → Viruses → environmental samples → uncultured virus	3
Not Available	1
All Organisms → Viruses → Predicted Viral	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Microbial Mats → Hypersaline Samples → Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → saline evaporation pond → hypersaline water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Coordinates
  • Lat. (^o): N/A
  • Long. (^o): N/A
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F065465	Metagenome	127	N
F066493	Metagenome	126	Y
F072017	Metagenome	121	Y
F076468	Metagenome	118	N
F088354	Metagenome	109	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
HQ1_100012	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum halophilum	2950
HQ1_100028	All Organisms → Viruses → environmental samples → uncultured virus	1832
HQ1_100031	Not Available	1682
HQ1_100080	All Organisms → Viruses → Predicted Viral	1104
HQ1_100119	All Organisms → Viruses → environmental samples → uncultured virus	923
HQ1_100265	All Organisms → Viruses → environmental samples → uncultured virus	660

Sequences

Scaffold ID	Protein ID	Family	Sequence
HQ1_100012	HQ1_1000126	F066493	MSEREWHDGVVDVADELVQEYSAAGAIERLQKRRQTENADLQARCNEAIAYIRREVIDE*
HQ1_100028	HQ1_1000282	F088354	MTDTPRAQLDVDRFETTTVNANGQVYLGRDLEGAKVHVAVEIVTDTDEQEDPDE*
HQ1_100031	HQ1_1000312	F066493	MSEREWHDGVVDVADELVQEYSAEGAIDRLQTRRKTSSDELQARCNEAIAYIRREVIDDQN*
HQ1_100080	HQ1_1000803	F065465	MTEEITVVCECDVLDEARSMGYRRYADMPAADIVAAWPLEYASHGSWDSHILPTLRCLAGYGDRGYGTYQQRQDVALIQNGDEADMPADAIILDSGHLLDDVIDAWHSGRHQAITDTLRQSDEHSLEDIQR*
HQ1_100119	HQ1_1001192	F065465	MTEDITVVCECDAKDEARTMGYRRYADMTAADIVASWPLEYASHGSWDTHILPTLRCLAGYADRGYGTYQQRQEIALIQDGDEADMPADAVVLDSGHLLDDLIEAWHSGRHQAITDTLRQSDEYSLEDIQR*
HQ1_100207	HQ1_1002073	F076468	MTKLEEIDTKAVWLSGRYWRREHKVVHIDGDCDQLDACDNPRGPVDPSVLQPDMSVCKRCDPTEPDQYGGSGTSLAHRLRHGDLQDATIDSDSVGGDE*
HQ1_100265	HQ1_1002651	F072017	MSKSTTSSLESQGDTNLKSTVHKHDAIHAVTQEHIDVFDEDDRLLDFYEWQQIIRSSETTVRRLAYSEIEEGVDQ*