3300003631: Hypersaline viral communities from Bras del Port, Santa Pola, Spain - LoValdivia P1

Overview

Basic Information

• IMG/M Taxon OID: 3300003631
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0069917 | Gp0107654 | Ga0061048
• Sample Name: Hypersaline viral communities from Bras del Port, Santa Pola, Spain - LoValdivia P1
• Sequencing Status: Permanent Draft
• Sequencing Center: Lifesequencing S.L.
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 19344232
• Sequencing Scaffolds: 18
• Novel Protein Genes: 19
• Associated Families: 7

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W	3
All Organisms → Viruses → Predicted Viral	5
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum aethiopicum	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halonotius → Halonotius terrestris	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Haloarculaceae	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. JWXQ-INN 858	1
Not Available	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Graaviviridae → Seejivirus → Seejivirus CGphi46	1
All Organisms → Viruses → Monodnaviria → Trapavirae → Saleviricota → Huolimaviricetes → Haloruvirales → Pleolipoviridae → Betapleolipovirus	3

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Samples → Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → saline evaporation pond → hypersaline water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Location: Bras del Port, Santa Pola, Spain
• Coordinates
  • Lat. (^o): 38.192206
  • Long. (^o): -0.591865
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F057206	Metagenome / Metatranscriptome	136	Y
F062489	Metagenome	130	Y
F066493	Metagenome	126	Y
F079661	Metagenome	115	Y
F097996	Metagenome	104	N
F098766	Metagenome	103	Y
F104555	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length
MetavP1_100028	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W	23148
MetavP1_100534	All Organisms → Viruses → Predicted Viral	4270
MetavP1_101533	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum aethiopicum	2219
MetavP1_102264	All Organisms → Viruses → Predicted Viral	1758
MetavP1_103567	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halonotius → Halonotius terrestris	1335
MetavP1_104008	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Haloarculaceae	1224
MetavP1_104429	All Organisms → Viruses → Predicted Viral	1144
MetavP1_104783	All Organisms → Viruses → Predicted Viral	1085
MetavP1_104856	All Organisms → Viruses → Predicted Viral	1076
MetavP1_107090	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum	834
MetavP1_107984	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. JWXQ-INN 858	768
MetavP1_109268	Not Available	686
MetavP1_110144	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Graaviviridae → Seejivirus → Seejivirus CGphi46	641
MetavP1_111430	All Organisms → Viruses → Monodnaviria → Trapavirae → Saleviricota → Huolimaviricetes → Haloruvirales → Pleolipoviridae → Betapleolipovirus	584
MetavP1_111632	All Organisms → Viruses → Monodnaviria → Trapavirae → Saleviricota → Huolimaviricetes → Haloruvirales → Pleolipoviridae → Betapleolipovirus	577
MetavP1_111974	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W	565
MetavP1_112332	All Organisms → Viruses → Monodnaviria → Trapavirae → Saleviricota → Huolimaviricetes → Haloruvirales → Pleolipoviridae → Betapleolipovirus	553
MetavP1_113491	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W	517

Sequences

Scaffold ID	Protein ID	Family	Sequence
MetavP1_100028	MetavP1_10002828	F062489	MSGPAAIILRERVAEGPTRRIVWHPLTSGGYERSEQLWRLAKEGWHTTGTEIVDALAIDCPRGQR*
MetavP1_100534	MetavP1_1005343	F066493	MSDAEREWTDGVIDVAEELVKRHSADGAIERLQTRRQTTDDELQARCTEAIAWIRREVQGDE*
MetavP1_100912	MetavP1_1009124	F104555	MTDRLDEILEGCGADIAALPLSDHDTIRQAVRRSIEHNGIHATGEHWAAVLDIIGPAPKEWIDTVKIVFNQEVAECF*
MetavP1_101533	MetavP1_1015335	F066493	MSDAEREWDDGLVDVADELVSEYSAAGAIDRLQRRRASTTNDELADRCVAAIAYIRREVQDHES*
MetavP1_102264	MetavP1_1022641	F079661	VGKALQTIGLPLFEMSQTTIQISEELRDELRNERKSHESNYGDTIERLLDDGTGGQLWTERELKDLIQREIEQVSRR*
MetavP1_103567	MetavP1_1035672	F098766	MTHPTCAVCGREADGADHVRVEVERVPPERPPETYYFHKRCFERSQGWEQR*
MetavP1_104008	MetavP1_1040081	F066493	MSEREWDDGLVDVADELVSEYSAEGAIDRLQRRRASTTSDDLADRCVAAIAYIRREVQDDER*
MetavP1_104429	MetavP1_1044291	F079661	MSNTTIQIPTDLRDELRDERLPHESNYGETIDRLLDDSDGGQLWTQSEIEDIVDNRIEAARRTR*
MetavP1_104783	MetavP1_1047833	F098766	MTHPTCAVCGREADGGDHVRLDVERVPPERPPETYYFHPRCFDRAQDWEAGL*
MetavP1_104856	MetavP1_1048563	F097996	HPRYLGFQVDWPVLVKMPFSADGKHWKKSEHFNWAERDLEMKDVASLYAQGFIYHNTELAKVNKIGDRLGEMNTEDLYRLVVQLNGIVKERTTTTKEYNDKRCKQSKIEDKQRGLIRRFLNRNPWIVEDFYKLRDHILGE*
MetavP1_107090	MetavP1_1070901	F066493	MSESEREWTDGVIDVAEELVHRHSADGAIERLQRRRQTTDDELQARCTEAIAWIRREVQGDE
MetavP1_107984	MetavP1_1079843	F098766	AVCGREADGADHVRLDVERVPPERPPETYYFHPGCFERAQDWEAGL*
MetavP1_109268	MetavP1_1092682	F057206	MNYVIYVLCFFTILNFIGISIAIARVAQFRKSVHGLDWEAVATLLGDVATVKRSITRLNGRLNGMDNAQPQFDWKDQAAQVLSQPPKPAAKGG*
MetavP1_110144	MetavP1_1101443	F066493	MTDAEREWTDGVIDVAEELVHRHSADGAIERLQTRRQTTDDELQARCNEAIAWIRREVQGDA*
MetavP1_111430	MetavP1_1114302	F098766	MTHPTCAVCGREADGGDHVRVEVERVPPERPPETYYFHKRCFDRAQAWEAGL*
MetavP1_111632	MetavP1_1116323	F098766	MTHPTCAVCGREADGGDHVRVEVERVPPERPPETYYFHPRCFDRAQDWEAGL*
MetavP1_111974	MetavP1_1119741	F098766	MTHPICAVCGREADGGDHVRVEVERVPPERPPETYHFHPRCFDRVQD
MetavP1_112332	MetavP1_1123321	F098766	MTHPTCAVCGREADGADHVRVEVERVPPERPPETYHFHPRCFDRAQAWEQE*
MetavP1_113491	MetavP1_1134911	F098766	MTHPTCAVCGREADGADHVRLDVERVPPERPPETYYFHPRCFDRAQDWERE*