Sample 3300003611

Basic Information
IMG/M Taxon OID	3300003611 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0110148 \| Gp0072751 \| Ga0007411
Sample Name	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_27 (Metagenome Metatranscriptome, Counting Only)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_27 (Metagenome Metatranscriptome, Counting Only)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	17636963
Sequencing Scaffolds	37
Novel Protein Genes	38
Associated Families	31

Dataset Contents

Total Genome Size

17636963

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
Not Available	29
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Fiersviridae → unclassified Fiersviridae → Leviviridae sp.	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium

Not Available

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei

All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Fiersviridae → unclassified Fiersviridae → Leviviridae sp.

All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7

All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales

All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes

Ecosystem Assignment (GOLD)
Name	Avena Fatua Rhizosphere Microbial Communities From Hopland, California, Usa
Type	Host-Associated
Taxonomy	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere → Avena Fatua Rhizosphere Microbial Communities From Hopland, California, Usa

Ecosystem Assignment (GOLD)

Name

Avena Fatua Rhizosphere Microbial Communities From Hopland, California, Usa

Type

Host-Associated

Taxonomy

Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere → Avena Fatua Rhizosphere Microbial Communities From Hopland, California, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	grassland biome → rhizosphere → soil
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

grassland biome → rhizosphere → soil

Earth Microbiome Project Ontology (EMPO)

Host-associated → Plant → Plant rhizosphere

Location Information
Location	Hopland, California, USA
Coordinates	Lat. (^o)	38.972988	Long. (^o)	-123.116539	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

Hopland, California, USA

Coordinates

Lat. (^o)

38.972988

Long. (^o)

-123.116539

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000344	Metagenome / Metatranscriptome	1257	Y
F000734	Metagenome / Metatranscriptome	915	Y
F000817	Metagenome / Metatranscriptome	879	Y
F001233	Metagenome / Metatranscriptome	741	Y
F001291	Metagenome / Metatranscriptome	729	Y
F001380	Metagenome / Metatranscriptome	709	Y
F001633	Metagenome / Metatranscriptome	660	Y
F005082	Metagenome / Metatranscriptome	412	Y
F005905	Metagenome / Metatranscriptome	386	Y
F008500	Metagenome / Metatranscriptome	332	Y
F010404	Metagenome / Metatranscriptome	304	Y
F012439	Metagenome / Metatranscriptome	280	Y
F014312	Metagenome / Metatranscriptome	264	Y
F014988	Metagenome / Metatranscriptome	258	Y
F015217	Metagenome / Metatranscriptome	256	Y
F015807	Metagenome / Metatranscriptome	252	Y
F020134	Metagenome / Metatranscriptome	225	Y
F022652	Metagenome / Metatranscriptome	213	Y
F024042	Metagenome / Metatranscriptome	207	Y
F027071	Metagenome / Metatranscriptome	195	Y
F027759	Metagenome / Metatranscriptome	193	Y
F027763	Metagenome / Metatranscriptome	193	Y
F029031	Metagenome / Metatranscriptome	189	Y
F038031	Metagenome / Metatranscriptome	166	Y
F039900	Metagenome / Metatranscriptome	162	Y
F048143	Metagenome / Metatranscriptome	148	N
F056193	Metagenome / Metatranscriptome	138	N
F081897	Metagenome / Metatranscriptome	114	Y
F092275	Metagenome / Metatranscriptome	107	N
F096396	Metagenome / Metatranscriptome	104	Y
F100158	Metagenome / Metatranscriptome	102	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0007411J51799_100001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
Ga0007411J51799_100015	Not Available	603	Open in IMG/M
Ga0007411J51799_100016	Not Available	846	Open in IMG/M
Ga0007411J51799_100085	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	822	Open in IMG/M
Ga0007411J51799_100091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	551	Open in IMG/M
Ga0007411J51799_100450	Not Available	600	Open in IMG/M
Ga0007411J51799_100468	Not Available	598	Open in IMG/M
Ga0007411J51799_100563	Not Available	824	Open in IMG/M
Ga0007411J51799_100646	Not Available	812	Open in IMG/M
Ga0007411J51799_101518	Not Available	954	Open in IMG/M
Ga0007411J51799_101839	Not Available	1035	Open in IMG/M
Ga0007411J51799_101884	Not Available	741	Open in IMG/M
Ga0007411J51799_102836	Not Available	773	Open in IMG/M
Ga0007411J51799_102852	Not Available	526	Open in IMG/M
Ga0007411J51799_103670	Not Available	555	Open in IMG/M
Ga0007411J51799_103936	Not Available	797	Open in IMG/M
Ga0007411J51799_104369	Not Available	767	Open in IMG/M
Ga0007411J51799_104529	Not Available	808	Open in IMG/M
Ga0007411J51799_105257	Not Available	541	Open in IMG/M
Ga0007411J51799_105382	Not Available	520	Open in IMG/M
Ga0007411J51799_105830	Not Available	867	Open in IMG/M
Ga0007411J51799_106007	Not Available	706	Open in IMG/M
Ga0007411J51799_107069	Not Available	587	Open in IMG/M
Ga0007411J51799_107592	Not Available	664	Open in IMG/M
Ga0007411J51799_108128	Not Available	711	Open in IMG/M
Ga0007411J51799_109001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	749	Open in IMG/M
Ga0007411J51799_109551	Not Available	883	Open in IMG/M
Ga0007411J51799_110662	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Fiersviridae → unclassified Fiersviridae → Leviviridae sp.	533	Open in IMG/M
Ga0007411J51799_112027	Not Available	780	Open in IMG/M
Ga0007411J51799_113388	Not Available	574	Open in IMG/M
Ga0007411J51799_115646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	714	Open in IMG/M
Ga0007411J51799_116009	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales	1148	Open in IMG/M
Ga0007411J51799_116036	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes	574	Open in IMG/M
Ga0007411J51799_117787	Not Available	568	Open in IMG/M
Ga0007411J51799_120017	Not Available	575	Open in IMG/M
Ga0007411J51799_120499	Not Available	544	Open in IMG/M
Ga0007411J51799_123360	Not Available	989	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0007411J51799_100001	Ga0007411J51799_1000011	F014312	SRRLRLLRPTKGTANGVVRLWERVKAERFALAMTPLVEAERLARKTERFSERPDKNG*
Ga0007411J51799_100015	Ga0007411J51799_1000151	F001233	LTLSVSRIIPGDWGKVESGWLAQLLRERIERSEGRGRIHQFLWQRSRAVSKREKGTEGTRND*
Ga0007411J51799_100016	Ga0007411J51799_1000161	F000817	KELRWMAAVNRLKPEVSRIIPGDWGKAESGWLARLLLSRIARSGSGGRIHRFL*
Ga0007411J51799_100085	Ga0007411J51799_1000852	F000344	MRPKHPHAAESGVGKHTARESERVQACAAGKERVTNAHPHKAK
Ga0007411J51799_100091	Ga0007411J51799_1000911	F001633	GVRHALFPGGTLLGALAFAGGVLPDATLRGMRMSRSHGGTVLTVAGRDLSSEASAPGSDAPCRERRAGRGADTPATITVSRLHPYHGDGTGFWPAVGPALRV*
Ga0007411J51799_100450	Ga0007411J51799_1004501	F027071	IFAALPCGGAVSSNAIDNNIELKLTTTPLRKQLPLFVQRRHRPSMPLAPALANLRSKHKRQHGNAPSGQRINSLRNHFTGKRFASSLPLHQLSLTLRIKIIGHFNKAKLNSTDTSLLAKLCISSANALANILAIGNFTLLANHQTAVPEEISFDLLGPFNRRYCYPRSAAISASCPTNTSTPNRQGNSCKYCYLAEVIR
Ga0007411J51799_100468	Ga0007411J51799_1004681	F010404	MQPFTLLQRRSALRQIPAAGSTLLAYIFKAALEFQLTRSASRSRPGPAFFRLTGLVQRESPVANFLS*
Ga0007411J51799_100563	Ga0007411J51799_1005631	F001233	TAAVNRLTLDFSRIIPGDWGKVESGWLAQLLLSRIARFGSGGRIHQFLWQRSRAVSTREKGTER*
Ga0007411J51799_100646	Ga0007411J51799_1006463	F081897	LNGGWEFAKLSFPCRHLAPYLSMAAGFPTLFSTASGVFGLVAGPSSTLRLLNFE*
Ga0007411J51799_101518	Ga0007411J51799_1015181	F038031	NRYRTADGEFEIIISNNLRQARDGIANASIKLVRRLPDPTPSNVFDNYRDIRNLFGFTYSFDAQTRAEASVDVPRLRTALLALVDSTLQGRIIAGEK*
Ga0007411J51799_101839	Ga0007411J51799_1018391	F048143	MIDERLAAWQAGDYPEGWSVYDALGWSRNEYMTWLADPSRVPERPLSALPDPEIYAPLERHEERVESA*
Ga0007411J51799_101884	Ga0007411J51799_1018841	F027071	PQVTTELSQAIRDLSLSSILISSCPLIKSAWKKIGSNLISFYLHTHSKIAALPCGGAVSPNAIDNNIELKLTTTSLRKQLPLFVQRRHLPSASLAPILANLRSKYKRQQSNAPSGQRINSLRNYSAGSCLTPSRPLHQSLSSLRTKITGNINRAKLNNIGTFLLAKSCAGGSITLAGSLAVSNLTLLANHQTAMPEKISFDLLGPLIRRYCYLRSATASAGCPVNTTTPNKRANSRKYCYLAKVIR
Ga0007411J51799_102836	Ga0007411J51799_1028361	F015807	DRYPKVGVMPHRPEWMEGMERLVRHDGESRDTDRPTWSHHRRCSGGQGARREAGSERLEENHRVVINGSDPER*
Ga0007411J51799_102852	Ga0007411J51799_1028521	F000734	VKTFRNVGDIKNDTADLKMKSNLRVERRDPWHGANALPKAVADLVLSVEDAEK*
Ga0007411J51799_103670	Ga0007411J51799_1036701	F022652	GTIERTTRMLSVRSAAKCALSSVCCSPLLPFSLPRVNTANAVFGYRTLPEPVSRCGLSLTRNDTFAPFRGQCSRPAPSIPRRTPSRIRSIQNSIAPFGFEADPGRYPCPKPVFRADFRRSRGFSQPPLPFRPFRALRIKAFSRLPPHEARPARPRFPFAPLAVSFDSTPDQRLRFSASCPTNRS
Ga0007411J51799_103936	Ga0007411J51799_1039361	F024042	MIEPVTRAHEDGLVPDSSLSAEGKLRRAETALWGTSFRDEGKHGEPHDRQQGATPLHGRGGESVEVVRNHGDGTRGGLAAHPRRETRRRGSRASDSSASYDGGAIFGQPQERKSDRQVGPHGSGRDGKVGVKVRRVARVHGFVITRARS*
Ga0007411J51799_104369	Ga0007411J51799_1043691	F012439	SPPEVPASPAAAQPGSPRPALPLMDLVLPGVLYADELRGHWVPRFRHDLGFSPWPSRSLFVCRRLHLSMKFHPPASFPPPAESCGLRAALRAWSNLATRPNSRRAPPMGSSSLIATSAGGVHHSAGNPDPAVTFRPRRFSRPRRFPPPPAFAGLFHPAATSRVCPSGDCPSPRSRTGFPRPHHALVPLSAAACDQRPRPRLQGLAPRCECGVGRDGLGLDRSAPLMGFSSPGYSPRTTWECLRIPYALGLHREEP
Ga0007411J51799_104529	Ga0007411J51799_1045291	F027759	EAAAENKIEAARFTDNPGRPGKSQIRLVDLAPQNRGASHGEAKFTSSSGGVRTPSNANEELGSEKR*
Ga0007411J51799_105257	Ga0007411J51799_1052571	F001380	GFTARFSDPSACGRSLCGEMLRINHLPLAITAFQHATGHSNKHVLIGLSTLPEPESRYGLSLARNDACATIARSMFLTCTFVSTSETLANPFDPRLLRSVRFRGRTGAISSPGTRYPRRSPTLLIHPRSPLPFRFSVENLPDQSVQPVPFQEARLT*
Ga0007411J51799_105382	Ga0007411J51799_1053822	F015217	VTQHNVRRIEQALAFLSREVAQTKPDNTVMLSVISGTSVLAFTKVPGSAVT
Ga0007411J51799_105830	Ga0007411J51799_1058301	F039900	MNHSLADQDRETWNYVLSDYRTESERDSEADIPVPDRLLPRRRSLELVRMLKLGQMVGILLWLNRENLITLGGRERLLYLQSKASFEALEAGLRFARRLTQEEKLRSDFRHQMRELNRRPQSKHFRQSEARRIGVGYRDKGMLPEASSGARTAAQKDSFIPSHLIPNILLGSIRTVIPACLTADEEWVDLSMVAGSFGTQADIGARPLLPPL*
Ga0007411J51799_106007	Ga0007411J51799_1060071	F048143	PQHGGGHRPDAPMRERPSADMIDERLAAWQAGDYPEGWSVYDALGWSRDEYMTWLTDPSRVPERPLSALPDPEIYAPMESHEERVESA*
Ga0007411J51799_107069	Ga0007411J51799_1070691	F029031	EVDWTVNLVSGSGPGTLIRWRTNKMECRRGAKGNRADHKGELFAGWLD*
Ga0007411J51799_107592	Ga0007411J51799_1075921	F024042	MIEPVTRAHEDGLVPDSSLSAEGKLRRAESALWGTSFRDEGKHGEPHDRQQGATPLHGRGGETVEVVRNHGDGTRGGLAAHPRRETRRRGSRASDSSASYDGGAIFGQPQERKSDRQVG
Ga0007411J51799_108128	Ga0007411J51799_1081281	F027071	VRVFSLSSILISSYPLIKRARKNINSNLISFYPQSHSSKAALPCGGAVNSNVIDNNIELKLTTTSLRKQLPLFVQRRHHPSLLFVPVLANLPSKQRRQQSNAPSGQRINSLRNYSAGNRFASSPPLHQLLSSLRTKITGNINKAKLNSIGAFLLAKSCAIGSITLASNLTVSNFLLLAKHRIAVPEEISFDLLGPSNRQYCYHRSAAVPPGCPVNTSALNRRANSCKYCYLAEAIR
Ga0007411J51799_109001	Ga0007411J51799_1090011	F020134	MTPARGAGDIACPTVARLKGRVAPAAAFLSPVARDYPNRALGGVFRPPRCDC
Ga0007411J51799_109551	Ga0007411J51799_1095511	F100158	GNQQCSAGRNLEQVGDLERGKPGSRLATRCRLAKRTHEIFAKAMSGRGHEGALDGVERENLEEDEAHEGIGRCVG*
Ga0007411J51799_110662	Ga0007411J51799_1106622	F096396	MAVRCCTSATRDIKTVVSRTEHEGLSFLAITLADFGKAIQKWLDQGFVVPSDAPSFKTGCGRRNGLPAFLQGFLGRVFDPCSGALLDEPDIE
Ga0007411J51799_112027	Ga0007411J51799_1120271	F056193	TPAPSRGSEDPHVGRCFLSWALLPYDTCGTTDPHFARLPTSLRAASGVWVPPSRRPPSSLPTPCGAGASMGFTLQGLLLATIGTPSGAPCPPGVFRVDSPHPHGERADAAAFRVSIPSRARSAIPSPEGPGAPMPSWVSSLQSVHSPRPSPPLRFAGDPSTRVGRFDVPSRLRLEVFRLEEIGFPLSGMPALLGFITFRPSRHRGDRGGGRAHAFASRLVRVASGANRSEPPHITDPATAFAAARCRRPSVNGCLPLPIV
Ga0007411J51799_113388	Ga0007411J51799_1133881	F008500	TEAIFTLPNGMLGFIIADANDAIVEDSDILLDTNQNNFRAITSVSCSNCHASGFIPVVDEVRDIAIANARDIGLDRDEVEQLESIYVSPQEFARQVTQDSEGFYQRALQLADLPVQGGDPVSSVFLRFDQDIRVQDAAGDLGLTPDDLKDNLDLLDPVLSVLDRGTLDRDDFTAVYVDSLCILSTPLENQ
Ga0007411J51799_113926	Ga0007411J51799_1139262	F027763	MPMALTDPQTITINAVPGSMPRVFSEGSESSYMTSDGLWKLSLNHNLVKQGRTRHLLRFDHAKIAANPLVTSQNERVTMAIYMVVEVPPPGWYSLTEQQQVYTGFKGLMTASSDAIVTKLLGGES*
Ga0007411J51799_115646	Ga0007411J51799_1156461	F092275	KLNCASNLKMGVHMTRKTLLTTAAFVLTASVAYAGPNVTISKDNKMVSVPAGKAGMSGSWVPGGEAYSNFAKKYPNGLYFCCYGYTLSGPSSFFGAAYATATQWTQAADADVTKLSAAVGYVSGDHTATLTLHSDSGSDTPGAKLGSRTGTTPEFFGGCCGVLTVKLKKPVHLSAGQKYWISITTGGANFNAAPFSTIDQVNPHNGAGSSNGGTTWSGFQSTLVATVSAK*
Ga0007411J51799_116009	Ga0007411J51799_1160092	F014988	MSFAPSTPVTGAAVTAFTSPTYTITADVAPSINGKQYAVTALGGTQANVDVNSVSKPFTISFFRPVVLRTLPQANPVTGIIKNVPMNTYKLITRKGAQPAASQVNMTARITTTIEVPAGTDTYEPEEIKAMISAHFGTGWAQASGIADTVTTGVL*
Ga0007411J51799_116036	Ga0007411J51799_1160361	F005082	RRLLRVDTSKMTADPFRPAENVQVSMSNYLVFDLPKAGFTPAEANAVWQGFKTLIIGSSDLMIVKLLGGES*
Ga0007411J51799_117787	Ga0007411J51799_1177871	F005905	QGALNSPFWGTPLVAPYQITLPDANPLDLQLTFVNSCIVPGGPFAGTSGIAVIIGGSTPGLTNTANLETNPAPGSDSNARLDIRIRDSASIPIPNAHVTVLIDKGSLAMRRDISNFPNGGYEVIEPVPAANYGSAFSGDTCDQATSGWWTQSTTNGNYTWPYLTASRQQQDGYTNIDGIISACVYVDT
Ga0007411J51799_120017	Ga0007411J51799_1200171	F001291	QKFYWKAPCDGQAFTNRIAVSDVKATQGGKTVDEQGGMDISVNLDLAAQINDQYGEIKKPLVDIGILEYAKNLMGKCEWKKVPTLGYLDNIDSCKIVKNCHLTGSPTSLDASVSIKDIAGPLYAGINTNTYYGLTMTFKDDKNPVMCVYSQDVIIKK*
Ga0007411J51799_120499	Ga0007411J51799_1204991	F005905	TSNIEIVPAPGSDDDARLDIRIRDTASIPVPNAHVTVLIDKGALALRRDLSSFPAPQGGGYDPIEPSAPNYASPFAGDTCDQANNGWWQQSTSTGSYTWPYLTTSRQQADGYTNVDGIISACVYVDTTLAPGTTPGKINVQAIVESPNQGGLYNPALGTNPYYPLGNNLSLPNYLGVPNI
Ga0007411J51799_123360	Ga0007411J51799_1233601	F038031	NGSGLSLPRTEAAKDYNRYKTADGEFEVIISNNLSQSGNNGIGTASIKLVRRLPDSTPGNAFDAYRDIRNSFGFSYSFDAMTRAEASIDIPRLRTALDTLVTSTLQGRIISGEK*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003611: Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_27 (Metagenome Metatranscriptome, Counting Only)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences