NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300003364

3300003364: Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/21



Overview

Basic Information
IMG/M Taxon OID3300003364 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0103000 | Gp0061307 | Ga0006271
Sample NameDeep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/21
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?Y
Use PolicyOpen

Dataset Contents
Total Genome Size81327445
Sequencing Scaffolds1
Novel Protein Genes1
Associated Families1

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameDeep Subsurface Microbial Communities From Mt. Terri Underground Rock Laboratory, Switzerland, That Are Autotrophic
TypeEnvironmental
TaxonomyEnvironmental → Terrestrial → Deep Subsurface → Clay → Unclassified → Deep Subsurface → Deep Subsurface Microbial Communities From Mt. Terri Underground Rock Laboratory, Switzerland, That Are Autotrophic

Alternative Ecosystem Assignments
Environment Ontology (ENVO)terrestrial biomeboreholeclay soil
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Subsurface (non-saline)

Location Information
LocationMt. Terri, Switzerland
CoordinatesLat. (o)47.379Long. (o)7.1648Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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