3300003363: Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - Phoenix Before-Phoenix assembly at KSC-PHSF (megahit assembly)

Overview

Basic Information

• IMG/M Taxon OID: 3300003363
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0095512 | Gp0093991 | Ga0041049
• Sample Name: Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - Phoenix Before-Phoenix assembly at KSC-PHSF (megahit assembly)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 80391179
• Sequencing Scaffolds: 1
• Novel Protein Genes: 1
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Araneae → Araneomorphae → Entelegynae → Orbiculariae → Araneoidea → Araneidae → Araneus → Araneus ventricosus	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Clean Room Microbial Communities From Nasa Spacecraft Assembly Facility At Jet Propulsion Laboratory, Pasadena, California, Usa
• Type: Engineered
• Taxonomy: Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Clean Room → Clean Room Microbial Communities From Nasa Spacecraft Assembly Facility At Jet Propulsion Laboratory, Pasadena, California, Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Surface (non-saline)

Location Information

• Location: USA: Phoenix, Kennedy Space Center
• Coordinates
  • Lat. (^o): 28.5853
  • Long. (^o): -80.6508
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F005984	Metagenome	384	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
JGI26493J50217_1034467	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Araneae → Araneomorphae → Entelegynae → Orbiculariae → Araneoidea → Araneidae → Araneus → Araneus ventricosus	592

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI26493J50217_1034467	JGI26493J50217_10344671	F005984	MVALLEVCTKEEQRAVIRFLWLEGVKGSEIYLTLSSQYGGSALS