3300003314: Hypersaline bacterial communities from Bras del Port, Santa Pola, Spain - Pena Hueca_Prokaryotes

Overview

Basic Information

• IMG/M Taxon OID: 3300003314
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0069917 | Gp0103939 | Ga0057743
• Sample Name: Hypersaline bacterial communities from Bras del Port, Santa Pola, Spain - Pena Hueca_Prokaryotes
• Sequencing Status: Permanent Draft
• Sequencing Center: Lifesequencing S.L.
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 229217634
• Sequencing Scaffolds: 7
• Novel Protein Genes: 7
• Associated Families: 4

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	2
Not Available	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax → Haloferax sulfurifontis	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Samples → Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → saline evaporation pond → hypersaline water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Location: Pena Hueca, Alava, Spain
• Coordinates
  • Lat. (^o): 42.65689
  • Long. (^o): -2.670449
  • Alt. (m): N/A
  • Depth (m): .2

Associated Families

Family	Category	Number of Sequences	3D Structure?
F066493	Metagenome	126	Y
F083454	Metagenome	113	N
F085171	Metagenome	111	N
F098766	Metagenome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
ProkHueca_1010887	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	3002
ProkHueca_1013996	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	2565
ProkHueca_1027294	Not Available	1667
ProkHueca_1028005	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales	2238
ProkHueca_1033450	Not Available	1448
ProkHueca_1080668	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W	765
ProkHueca_1099584	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax → Haloferax sulfurifontis	626

Sequences

Scaffold ID	Protein ID	Family	Sequence
ProkHueca_1010887	ProkHueca_10108876	F085171	MSKRQKTHTDLDGLIDLDSRSLIKLGNSAVVSIPSADDLGIIGNIDDLDAAVSVRVVEPNQILIEARVDLSNVDLDDIDLTVD*
ProkHueca_1013996	ProkHueca_10139961	F085171	SGPRTAAWRATEDKMSKRQKTHTDLDGLIDLDSRSLIKLGNSAVVSIPSADDLGIIGNIDDLDAAVSVRVVEPNQIVIEARVDLSNVDLDDMDLNFD*
ProkHueca_1027294	ProkHueca_10272945	F066493	MTEQRREWADGVVDVADELVQEYSAEGAIERLQNRRQTSSDELQSRCTEAIAYIRREVLADEQS*
ProkHueca_1028005	ProkHueca_10280054	F066493	MSEREWKDGVVDVADELVQQNSAEGAIERLQTRRKTSSDELQARCNEAIAYIRREVQTDE
ProkHueca_1033450	ProkHueca_10334503	F083454	MSDKTTIGLKVSHERNARIERKVDDAGYRSRQAYIRDLIDDDLGFDSSVEATTSDQTPEDRRDAELYDALLDNISLKGWTRYERFSGDIAQSTGYSKDALFGELKSLRRNGFCTIRVLNPTDENPHYE
ProkHueca_1080668	ProkHueca_10806683	F098766	MSHPSCAICGREADGADHVKIDVERVPPEEPPETYYFHKRCFDRSQSWERGL*
ProkHueca_1099584	ProkHueca_10995842	F098766	LSHPTCSLCGREADGANHVKVEVERIPPEEPPKTYYFHPQCFNRSQNWERGL*