3300003309: Guam

Overview

Basic Information

• IMG/M Taxon OID: 3300003309
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0110137 | Gp0103705 | Ga0057736
• Sample Name: Guam
• Sequencing Status: Permanent Draft
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 113479370
• Sequencing Scaffolds: 7
• Novel Protein Genes: 9
• Associated Families: 8

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora	1
Not Available	3
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora digitifera	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Cnidaria Microbial Communities From The Caribbean, With Black Band Disease
• Type: Host-Associated
• Taxonomy: Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified → Cnidaria → Cnidaria Microbial Communities From The Caribbean, With Black Band Disease

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal surface

Location Information

• Location: Luminao reef flat, Guam
• Coordinates
  • Lat. (^o): 13.4644
  • Long. (^o): 144.6439
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000221	Metagenome / Metatranscriptome	1543	Y
F005840	Metagenome / Metatranscriptome	388	Y
F008935	Metagenome / Metatranscriptome	325	Y
F014703	Metagenome / Metatranscriptome	260	Y
F023524	Metagenome / Metatranscriptome	209	Y
F028418	Metagenome / Metatranscriptome	191	Y
F036052	Metagenome	170	Y
F052317	Metagenome / Metatranscriptome	142	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Guam_1001440	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora	4009
Guam_1004060	Not Available	4961
Guam_1034840	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	720
Guam_1057260	Not Available	544
Guam_1057261	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora digitifera	544
Guam_1063601	Not Available	516
Guam_1072944	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	616

Sequences

Scaffold ID	Protein ID	Family	Sequence
Guam_1001440	Guam_10014404	F014703	MGNVAEKQGLPLQQHFPYKFSYSFKTSDCHKISCFNDGGLKFGHFDILDMLFPFLAFVKL
Guam_1004060	Guam_10040603	F036052	MARQEVKRTLKFGFQVYRQFVCEEGFQDFCVGPILIANYILISPQFKK*
Guam_1034840	Guam_10348401	F052317	MAAGENRFAAELTEDELSKLLDNATPANTKKATKYSMKIFQGNKFC*
Guam_1051246	Guam_10512461	F000221	VAIQVKATEQYFPVVLFIMLYKVVITFESVDEILKCDNSNESY*
Guam_1056862	Guam_10568621	F000221	VDEIRTVIIQMKATEQCFPAVLFIMLYKVVLTFQSLDEILKCDHSKESY*
Guam_1057260	Guam_10572601	F005840	VFLAGYTVAMVTYCVTEMITMCSPMIGHFFDTMIVESSDKEWL*
Guam_1057261	Guam_10572612	F023524	MQKAIISETRRRLGDGFREHLRDVEKHDKDASKPAARHFNLPNHSNKHMSICSLSLHQGTTDSPKNLEQRFIFQIGTLNPQHQRTLFIQLIYSGFSRHQV
Guam_1063601	Guam_10636012	F028418	MIDLKYCFECDWFIELSDNKLSDNNLASELVENRSFLNQSQTRKL*
Guam_1072944	Guam_10729441	F008935	MIGQMAIVIALLGFNNLGCSVTPTFLFRNRFYLQLSPHCPKMNKKSMWEVKKISRFLSSGHGILPSCGCKAHETMVAKCELVL*