3300003251: Ircinia variabilis associated microbial communities from Achziv, Israel - Sample 142

Overview

Basic Information

• IMG/M Taxon OID: 3300003251
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0111492 | Gp0103163 | Ga0057483
• Sample Name: Ircinia variabilis associated microbial communities from Achziv, Israel - Sample 142
• Sequencing Status: Permanent Draft
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 60643956
• Sequencing Scaffolds: 5
• Novel Protein Genes: 5
• Associated Families: 5

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1
All Organisms → cellular organisms → Bacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Ircinia Variabilis Associated Microbial Communities From Achziv, Israel
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Ircinia Variabilis Associated → Ircinia Variabilis Associated Microbial Communities From Achziv, Israel

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus

Location Information

• Location: Achziv, Israel
• Coordinates
  • Lat. (^o): 33.01
  • Long. (^o): 35.04
  • Alt. (m): N/A
  • Depth (m): 5 to 9

Associated Families

Family	Category	Number of Sequences	3D Structure?
F014255	Metagenome	264	Y
F025263	Metagenome / Metatranscriptome	202	Y
F030805	Metagenome / Metatranscriptome	184	Y
F038905	Metagenome / Metatranscriptome	165	N
F045799	Metagenome / Metatranscriptome	152	N

Associated Scaffolds

Scaffold	Taxonomy	Length
IrcVar142_1001666	Not Available	8179
IrcVar142_1001803	Not Available	7313
IrcVar142_1003860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3118
IrcVar142_1004202	All Organisms → cellular organisms → Bacteria	2907
IrcVar142_1005394	Not Available	2384

Sequences

Scaffold ID	Protein ID	Family	Sequence
IrcVar142_1001666	IrcVar142_100166613	F030805	MEKKIVGAAGTLLLGVSAWLISTVYSIQVDTAIIKDKIEKVYEDNCPYCVHAAHSSIANHPLLGPTIKHSHQHIGREIVKTND*
IrcVar142_1001803	IrcVar142_10018032	F045799	MKKLFLALLFNLITLTAFSQDNFAGWWESKTSKYITMIYVGDYGVSQVVNYNPWNEDVIEERIIRRNKYTFVTHLFNKRNGYSVKIKYKLKDKNNLICKFTGDLKRTVHLTRYKFDLNNKLKT*
IrcVar142_1003860	IrcVar142_10038602	F025263	MAINPNQLHVAKIYPGNYTNVLRYWHEEKTVQYDNANGVSQNLANQPIGGPVGVVFRPGWIAQQAVGYVDLSFQALGTVNQLSYYTQPYGSGQPFSSASVIIPSPDFHKDVRADISNGIGAPAGAFVYRASLRVDGGDVVSSGIAGGSATPKISLVPAVGEGLLDDGTVVSGQFGVSVTGSDSRIANGSTASVNIIDSSSLAALSTETQWQLFATTDLGGVAASGLAQGSGVYDPRASANKLAGDDKALAICEVCWIIPDEPPERQDVALQPDGLVESSVYTSTSPS*
IrcVar142_1004202	IrcVar142_10042022	F014255	MAEATFNRELGEAPAGITRFGQFRNDDGLNVTVNSFRSFAADGRYGLADVYEITYGSTGTATVLLNAEAFGISGIAVYKADGTLAGEATAPKTTRRTGIGVGYSVTSGDTATVYVLRKGRSESEYRLTAFVL*
IrcVar142_1005394	IrcVar142_10053944	F038905	MTTFGSSQDGVATNVTTETKTIQTGRTRVYGVHVSGPNVAGVLDIKDGSTSKVKLNKAAHVHDMTINFPVPILFKTNLNTAFTTEQITAITVFHSGGNNS*