Sample 3300003159

Basic Information
IMG/M Taxon OID	3300003159 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0110115 \| Gp0061286 \| Ga0006771
Sample Name	Avena fatua rhizosphere microbial communities - H3_Rhizo_Litter_14 (Metagenome Metatranscriptome, Counting Only)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300003159 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0110115 | Gp0061286 | Ga0006771

Sample Name

Avena fatua rhizosphere microbial communities - H3_Rhizo_Litter_14 (Metagenome Metatranscriptome, Counting Only)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	4005913
Sequencing Scaffolds	36
Novel Protein Genes	40
Associated Families	35

Dataset Contents

Total Genome Size

4005913

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	2
Not Available	30
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia gladioli	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Promicromonospora → Promicromonospora sukumoe	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei

Not Available

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia gladioli

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Promicromonospora → Promicromonospora sukumoe

Ecosystem Assignment (GOLD)
Name	Avena Fatua Rhizosphere Microbial Communities From Hopland, California, Usa, For Root-Enhanced Decomposition Of Organic Matter Studies
Type	Host-Associated
Taxonomy	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere → Avena Fatua Rhizosphere Microbial Communities From Hopland, California, Usa, For Root-Enhanced Decomposition Of Organic Matter Studies

Ecosystem Assignment (GOLD)

Name

Avena Fatua Rhizosphere Microbial Communities From Hopland, California, Usa, For Root-Enhanced Decomposition Of Organic Matter Studies

Type

Host-Associated

Taxonomy

Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere → Avena Fatua Rhizosphere Microbial Communities From Hopland, California, Usa, For Root-Enhanced Decomposition Of Organic Matter Studies

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → rhizosphere → soil
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

terrestrial biome → rhizosphere → soil

Earth Microbiome Project Ontology (EMPO)

Host-associated → Plant → Plant rhizosphere

Location Information
Location	Hopland, California, USA
Coordinates	Lat. (^o)	38.97364	Long. (^o)	-123.117453	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Location Information

Location

Hopland, California, USA

Coordinates

Lat. (^o)

38.97364

Long. (^o)

-123.117453

Alt. (m)

N/A

Depth (m)

Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000817	Metagenome / Metatranscriptome	879	Y
F000864	Metagenome / Metatranscriptome	855	Y
F001011	Metagenome / Metatranscriptome	806	Y
F001418	Metagenome / Metatranscriptome	698	Y
F001633	Metagenome / Metatranscriptome	660	Y
F003269	Metagenome / Metatranscriptome	496	Y
F003427	Metagenome / Metatranscriptome	487	Y
F008133	Metagenome / Metatranscriptome	338	Y
F009871	Metagenome / Metatranscriptome	311	Y
F013305	Metagenome / Metatranscriptome	272	Y
F014482	Metagenome / Metatranscriptome	262	Y
F018114	Metagenome / Metatranscriptome	236	Y
F022652	Metagenome / Metatranscriptome	213	Y
F024042	Metagenome / Metatranscriptome	207	Y
F026580	Metagenome / Metatranscriptome	197	Y
F027071	Metagenome / Metatranscriptome	195	Y
F029638	Metagenome / Metatranscriptome	187	Y
F030647	Metagenome / Metatranscriptome	184	N
F034588	Metagenome / Metatranscriptome	174	N
F038031	Metagenome / Metatranscriptome	166	Y
F044324	Metagenome / Metatranscriptome	154	Y
F046210	Metagenome / Metatranscriptome	151	N
F053640	Metagenome / Metatranscriptome	141	Y
F055474	Metagenome / Metatranscriptome	138	Y
F062739	Metagenome / Metatranscriptome	130	Y
F063225	Metagenome / Metatranscriptome	129	Y
F066797	Metagenome / Metatranscriptome	126	Y
F067295	Metagenome / Metatranscriptome	125	N
F076910	Metagenome / Metatranscriptome	117	N
F081396	Metagenome / Metatranscriptome	114	Y
F085728	Metagenome / Metatranscriptome	111	N
F092500	Metagenome / Metatranscriptome	107	N
F099469	Metagenome / Metatranscriptome	103	Y
F100491	Metatranscriptome	102	Y
F102579	Metagenome / Metatranscriptome	101	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0006771J45828_100030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	817	Open in IMG/M
Ga0006771J45828_100032	Not Available	523	Open in IMG/M
Ga0006771J45828_100037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	812	Open in IMG/M
Ga0006771J45828_100040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	787	Open in IMG/M
Ga0006771J45828_100057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa	655	Open in IMG/M
Ga0006771J45828_100069	Not Available	562	Open in IMG/M
Ga0006771J45828_100073	Not Available	609	Open in IMG/M
Ga0006771J45828_100118	Not Available	608	Open in IMG/M
Ga0006771J45828_100151	Not Available	613	Open in IMG/M
Ga0006771J45828_100393	Not Available	574	Open in IMG/M
Ga0006771J45828_100404	Not Available	811	Open in IMG/M
Ga0006771J45828_101010	Not Available	506	Open in IMG/M
Ga0006771J45828_101236	Not Available	814	Open in IMG/M
Ga0006771J45828_101480	Not Available	688	Open in IMG/M
Ga0006771J45828_101525	Not Available	684	Open in IMG/M
Ga0006771J45828_101624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia gladioli	826	Open in IMG/M
Ga0006771J45828_101814	Not Available	669	Open in IMG/M
Ga0006771J45828_101991	Not Available	741	Open in IMG/M
Ga0006771J45828_102033	Not Available	571	Open in IMG/M
Ga0006771J45828_102054	Not Available	697	Open in IMG/M
Ga0006771J45828_102314	Not Available	579	Open in IMG/M
Ga0006771J45828_102446	Not Available	530	Open in IMG/M
Ga0006771J45828_102656	Not Available	703	Open in IMG/M
Ga0006771J45828_102676	Not Available	720	Open in IMG/M
Ga0006771J45828_102723	Not Available	1126	Open in IMG/M
Ga0006771J45828_102734	Not Available	585	Open in IMG/M
Ga0006771J45828_102749	Not Available	920	Open in IMG/M
Ga0006771J45828_102995	Not Available	1055	Open in IMG/M
Ga0006771J45828_103158	Not Available	575	Open in IMG/M
Ga0006771J45828_103385	Not Available	536	Open in IMG/M
Ga0006771J45828_103900	Not Available	516	Open in IMG/M
Ga0006771J45828_104690	Not Available	706	Open in IMG/M
Ga0006771J45828_105029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Promicromonospora → Promicromonospora sukumoe	658	Open in IMG/M
Ga0006771J45828_105058	Not Available	550	Open in IMG/M
Ga0006771J45828_105813	Not Available	513	Open in IMG/M
Ga0006771J45828_105843	Not Available	662	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0006771J45828_100030	Ga0006771J45828_1000302	F001633	GVGVRHTLFPGGTRLDALAFAGDVLPDATLRGMRMFRSHGGTVLTVAGRDLSSEASSPGSDAPCRERRAGRGADTPAIFIFSRRHPYHGDGTGFWPVVGPALRV*
Ga0006771J45828_100032	Ga0006771J45828_1000321	F000817	TLSVSRIIPGDWGKVESGWLAQLLLERIERSDSGGRIHQFL*
Ga0006771J45828_100037	Ga0006771J45828_1000372	F001633	GVGVRHSLFPGGTRLDALAFAGGVLPDATLRGMRMFRSHGGTVLTVAGRDLSSEASAPGSDTPAGSGAPDVVRTRLQTNFSRPHRCHGDGASLWLAVGPALRV*
Ga0006771J45828_100040	Ga0006771J45828_1000401	F053640	AESTAGIIPGDRGMAGDNWCRPPLLKAKADERHISPVPLAGVVSGQSTHEVGTEPQSAIRNRVERSQAHGEFRPVNRRSYPRGFRLLLRRPERSRGSRRDDPAKRPSSPHEPGAQRNHDGGERTDLGKVRQPPQMGRRAKPRHPAAKAKAT*
Ga0006771J45828_100040	Ga0006771J45828_1000402	F001633	VGVGVRHALFPGGTRLDALAFAGGVLPDATLCGMQMFRSHGGTVLTVAGRDLSSEASAPGSDAPCRERRAGRGADTPATFTFSRRHPYHGDGTSFWPAVGPALRV*
Ga0006771J45828_100057	Ga0006771J45828_1000571	F034588	PLIRTSGCPSFRISGFTGDRSSSRLDSLSFGGAGCESSRLPLRFASPVSPTISIRVAPDPHPPVPADFRSESPRSSVPSGRPLRISGLLRLFALGFVAQPFPKSPWFLLAQRRRFRLSRVAPKPSSSADPYLLPQVAPASASTAGSMITPWLNRTLHPRLAPWMNLRYQSGTSIPYLTSSALLISIHCPQSADHEL*
Ga0006771J45828_100069	Ga0006771J45828_1000691	F003269	LVWFAGRWRNHQSKRAEKPHSKSSGGNALDGPATRPETPLAVENSVGKLAAPEAPNASKGKRA
Ga0006771J45828_100073	Ga0006771J45828_1000731	F001418	SKGLSAEAEFTSSSGSVRALSVNAKKGLRDEERLETVPNSVK*
Ga0006771J45828_100118	Ga0006771J45828_1001181	F026580	SSRVVQESFEPERIAVTQRVNGCYCVSARANGSGGFRKEVSQRKDAERRDKVSVRTGEDTGSRQDP*
Ga0006771J45828_100151	Ga0006771J45828_1001511	F085728	MITDVSTVNVPLSPPETPHREVTHYKPGLASLNLQPVNSVLQSLWSGGPGCSTKNTLFRQATPKKSEDPSKVPPEGGK
Ga0006771J45828_100393	Ga0006771J45828_1003931	F062739	PVRSPPACTALSYAIKSAGRFACRLLNERFRRSQNQCLQARRLLPLSRDRIARDGLSLACNGCHLSAASIPGSKLPACHFAPFQVSVHARSALQLRYHVTGLRRSRPPQRLWPVALPPPDSADRAYRLRSPLGCLFPLGSKRSTAFAARRSA*
Ga0006771J45828_100404	Ga0006771J45828_1004042	F003427	MVKTRIRNHKRVLTWFASRRPQTPAEASLEASLDFSDRKALDGPAMRPTIPLAVENGVGKLAANVRQMPAWERECGELPSP
Ga0006771J45828_101010	Ga0006771J45828_1010101	F014482	ASLLPENLFPGSRINASWLAACFTLPGTGPLVTAFRSPATAAASRLPPFRGQSSQPATSRPPESFPCPVRPWLRNCLPGLLRWRLLHSLGPVTLPLPGPACRIALSPLPSGSFSSLGIKAFNRACCLPGPPGESARSPFAPRCPFSKVGASDQRSRAATFPPACCSSN
Ga0006771J45828_101236	Ga0006771J45828_1012361	F081396	SDQAPDRRTLKIIIESDCDELGERSWAAPAVTLLVGFGEKNPEEEKPRRGSDPVGG*
Ga0006771J45828_101480	Ga0006771J45828_1014801	F092500	GPGILIGGGILMIIGVILVVISINSLSSLSVSMPTDISTKSLIQSALNFNQTAVKETARTVGISLGLAFSGMLVATILIVNGIIALIAGMVIFFIDRRHKKIKFSTSARR*
Ga0006771J45828_101525	Ga0006771J45828_1015251	F046210	VIVANIQMKNLKIEAEKGFRRTLFEPELVDPNLEINFVNDAEAALKSCNVNS*
Ga0006771J45828_101624	Ga0006771J45828_1016241	F067295	RTVAVRRAENSAESTTGIIPGDRGKEGGSWCRPPLPMGNHWVGKITSSSGRCHDRSSDMTQELSGQARYRNRVRAESGSREVSTRRPDAVTQRVTAATAQTRTQTRIPAGQPKVSPAKRPRPLKTAGARNGDAIVGSERDRQIPPNLLD*
Ga0006771J45828_101814	Ga0006771J45828_1018141	F027071	RPQVTTELSQAYRVSFLSSILTSSCPLIKRARKKICSNPISCYQHSHSGIAALPCGGAVSSNATDYNIELKLTTTLLRKQLPLFVQRRHLPSMPLAPVLANLRSKHKRQQGNAPSGQRFDSLRNHFTGKRFASSLPLHQLLLPLRTKITGHFNKAKLNSTDTSLLAKLCISSANALANILAIGNFTLLANHQTAVPEEISFDLLGPRLTGHIATTGLLPYQSV
Ga0006771J45828_101991	Ga0006771J45828_1019911	F027071	PQVTTELSQAIRDLSLSSILISSCPLIKSAWKKIGSNLISFYLHTHSKIAALPCGGAVSPNAIDNNIELKLTTTSLRKQLPLFVQRCHPPSASLAPILANLRSKYKRQQSNAQSGQRINPLRNYSAGSCLAPSRPLHQSPSSLRIRITGNINKAKLNNIGTSLLAKNCAGGSITLAGSLAVSNLTLLANHQTAMPEKISFDLLGPLIRRYCYLRSAAASAGCPVNTTTPNKRANSRKYCYLAKVIR
Ga0006771J45828_102033	Ga0006771J45828_1020331	F022652	SRVHGTIERTTRMLSVRSAAKCALSSVCCSPLLPFSLPRVNTANAVFGYRTLPEPVSRCGLSLTRNDTFAPFRGQCSRPAPSIPRRTPSRIRSIQNSIAPFGFEADPGRYPCPKPVFRADFRRSRGFSQPPLPFRPFRALRIKAFSRLPPHEARPARPRFPFAPLAVSFDSTPDQRLRFSASCPTNRSVN
Ga0006771J45828_102054	Ga0006771J45828_1020541	F024042	ALWGTSFRDEGKHGEPHDRQQGATPLHGRGGESVEVVRNHGDGTRGGLAAHPRRETRRRGSRASDSSAPYDGGAIFGQPQERKSDRQVGPHGSGRDGKVGVKVRRVARVHGFVITRARS*
Ga0006771J45828_102314	Ga0006771J45828_1023142	F030647	GANFLLYLRTPKIRPEIETRLGYPVLNSDHVHLSDMTVFIASSSVHLLFVIQHGGKIKPKIGPKVIHILLALEKLFLL*
Ga0006771J45828_102446	Ga0006771J45828_1024461	F066797	LNTHQIISSADLGGSSNYSKETHLKCSLTLKTEVAKVFMTTAIAHELVDPNPKDYEK*
Ga0006771J45828_102656	Ga0006771J45828_1026561	F081396	GKERGLVAGSQGSEAGTEPRAGRSISGESDQAPDRRTLKIIIESDCDELGERSWAAPAVTLLAGFGEKNLEEENPRRGSDPAGG*
Ga0006771J45828_102676	Ga0006771J45828_1026762	F102579	LRLPFPTTFAVGSSSRKLSLPCRVLPNRARSVAAVRRRRLPGGFVPLRDINQRRHIWSASPTSQTVPSSAFRTPSTVSSATGLVGLFHPTATYRVRSPRVFPPMKPYRLVDGPYPRRWRLPAVRRLPAVRHEPAPRLQGFLFIGIRCDGVAV*
Ga0006771J45828_102723	Ga0006771J45828_1027231	F038031	RVGFRPRGLRTFGVKVPPALRSRQGWKERSVFSDPFSITYDGNVKSLPRTEVARDYNRYTTADGEFEVLISNNLRKPQNGIATVSFKLARYLPDPTPGDFSNPYRNVRNSFGFSYGFDAITRAEVSVDVPRLRATVNTLIDSAFQGRLLGGER*
Ga0006771J45828_102734	Ga0006771J45828_1027341	F013305	VKGRFEQPEPVRNGLQAGFRALIRRSIKGTAGSEEDFVRRFLAARLMPCMPAGVELSNESLG
Ga0006771J45828_102749	Ga0006771J45828_1027491	F044324	QRTARQNGGPRGGGRRKPEEPKARKLEREDHLGIDGRAGDGDTLWIIAAGHTQHRREKIVNGDDGNDVVEVIRAEPEGAGTHEGIRMFVGGNTTADVADPGLEQSFEVDASQAGVGSNTDRKAAPTARKQRVSTRDHGWPGGGSP*
Ga0006771J45828_102995	Ga0006771J45828_1029951	F063225	LRGVISLAVGQKDQLVNITISVWADPVNPATYMRNGQTVPAPAFTTLSDTKGFFAINTLSFDLGSANRAQGQGKRRFYFSLTGQFTDRTSGSDVVTTLLPLWWNYELTNRQWGGSGDLTGTNNSPSFYFYMTPPFTTADSLIRVILSWGTLISNPSNSLPDLDLVVAGPVDQTSIATYGNGIINFENKDLHSSNQILPYAKLVTDSAQGYGPEVVDFYGVPGQLAIGFSSSYSAGAAANAYEIWVDRPNSSPNTDSAFTFLYDTNSFIVVYQADAGDGNKQVLFDARTKVPYAYGFYNTDQWNKVPTAATIWHIIDISQAQQGIVFNGFPGENNTADTTAYAGAKYGFGSA
Ga0006771J45828_103158	Ga0006771J45828_1031581	F076910	PRCQARSVQTYQVFRAQAGECRAVATVPYVPKSSRTAGPLMVSRCVSTGAPPVLGGHGDRQLAGSVHTYRVCRGTETLGPSSEVTRLRRSRNPARAILLDLANDTDEHVRPGNPAPANGSPSSNRGRLEEKPITLKARPHRSTVAPITGPRLGGRGSKEAHQKWPDLGVALRGEGSVLPNVLGAVTEQAIA
Ga0006771J45828_103250	Ga0006771J45828_1032501	F100491	VPSDPQAACSPTGMHDQNVASGTGETALCSPPLVLANRGSVRRCASAFNPGRSPLLDATFRSTASRTGLATDPRNCVNVPGLHLRNDPQIFGPFGAALLPPLSLLLASRGAIYARNPLLDPISGLMTRLRIPAPLWDLSTPRDQSSQPGFEP*SLPLQVARSSFAPRSAATIVSHHSSATDHRSRSATPCQARCPSN
Ga0006771J45828_103385	Ga0006771J45828_1033851	F008133	FQVIWFPARSPPACTALSVAIKSAGRFACRLPYERFLRPQDRCFQTRRSLPLSRDRVARNGLSLTRNDCRLSTASIPGSKFQTCYFAPSRIGFRARSANWLCYRLPGLLPGYGRFHASGPLRFYHPVRLAALTVSTPPHEYYLLRDQSVQRRMPPAGPPGEFARFPFAPRHPPFQFGC
Ga0006771J45828_103681	Ga0006771J45828_1036811	F001011	FLNSSEDMMNNIKNDEMLTVLRQHAGIVQSDLSYLDNDGKAVVDILAVGKLQAALLPVLVDALKYIPIPKIYSNDSEREFWLDNVVLCSYDIIPENIKFQLQTDTQVSMRDIEVKGTHTHMVIELDKLLTEIKDIEFFYRKKSFPGFEDHGKVTFRITGNGAKLVFTYNLLQRPEDKVPRISEGKVSFDISAMSIDFDKSTLRHPTMVPMLTQLWKMQIRHQIE
Ga0006771J45828_103900	Ga0006771J45828_1039001	F055474	MPLRIGAFSRFGSLQVHLRKMPDLLSLPAARLHLNDDGFGSMFQVRYIPRGSLFP*
Ga0006771J45828_104690	Ga0006771J45828_1046901	F018114	KACMFQGAEHDVGAQWDDSVAYFTCVKEGDNVRVITLGCVDSGKQMKLDDRVAKGDFVYQCKKATDGTPKMNKVGCIQNGRKYNIGETFEGPKFWYTCTDSGSKIVGCMYESHRLVDGDHFTQGDMMYSCKVRGEETFFEPFACLAREENGAAIERKVGCSWVEGKGPMAYEYTCKPDSNNKISKVQTQCVYRSSQGVFKLAPGCVQLAGDVAVGCLQNSDSLKIETYSPDQIGS
Ga0006771J45828_104718	Ga0006771J45828_1047181	F029638	VVQNPCDTAGTQGSWNFVNTLPVITGQTSAQFGFSCASVGVVTPSTFPNGLPAGQYRVVEVAGPNSFCTLVQVYNGNQANNQQLTLPYSGAMLTQPVTLNLPSANIYDLQLTFVNSCVVPGGPSTATSQIAVVIGGSTAGLVNTSNVEISPAPGSDDDARLDIRIRDAASIPIPNAHVTVLIDKGALALRRDFSSFPNSGFDPIEPFPAAANFASPFSGDTCDQSNNGWLTQ
Ga0006771J45828_105029	Ga0006771J45828_1050291	F099469	VQVRVACPNDNTAAGIKVCIAGSITGCAYTDGLGVAVLQVPAVGTYTLCVDESTLPAGAKLNPNCQKIKVLTEDTTYVDVALTGTFCGTTPPPGPCWMTGGGTIGPGKTPNFSYGGVVYPGCSPKAAEGGNWNVIDHVNNLHFQGQAIVVDSCSGDGTSSPAVTVRTIDFHGTGLLSANGGNPAENAPCTFVARVTDNHDGGKGADQLYLRVTVGGSTV
Ga0006771J45828_105058	Ga0006771J45828_1050581	F009871	AEQAVHSAIEGLKEIVEDNTKFVVSKVHHEAVKPLVVEQKTVDLTNDVNKAIERAKEAQPKIVENVTVDLTDRLKNLVPKVEENITVDLTDRLKNLVPKEDDHQNIQGGLKENANWEKEGIKDNVNYAKDVFGENASQKENTHFTQNILADNVHFKENPSEVFAKGLPVGSTDRIPEYSPNIN
Ga0006771J45828_105813	Ga0006771J45828_1058131	F000864	QFLVIISLIVAVLGQTKPTLSNDFAANVDYTEKTNARTFSIKGAWYSDFTDGADAYDVTLADVGEVLIYENKTQRGMTEYVFRKDAATCSRFDAPTFLPHPFSFLTNAVNNGTCYSTTNMTGTAWSVFDPRAANITLCASNDGTTPYWLAEIRFGVFHSTRTINWNSFIA
Ga0006771J45828_105843	Ga0006771J45828_1058431	F038031	MFTDPFSVTYNGSGLSLPRTTVEKDYNRYNTADGEFEVLISNNLRKPQDGIATVSIKLIRRLPDPTPGDVFNDYRMIRNSFGFSYSFDAQTRAETSVDVPRLRTALDTLVTSGFQTRLISGER*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003159: Avena fatua rhizosphere microbial communities - H3_Rhizo_Litter_14 (Metagenome Metatranscriptome, Counting Only)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences