3300003091: Hot spring microbial communities from Five Geothermal Springs in Yellowstone National Park, USA - Norris Geyser Basin, Beowulf Spring

Overview

Basic Information

• IMG/M Taxon OID: 3300003091
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0061992 | Gp0051684 | Ga0051076
• Sample Name: Hot spring microbial communities from Five Geothermal Springs in Yellowstone National Park, USA - Norris Geyser Basin, Beowulf Spring
• Sequencing Status: Permanent Draft
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 3611415
• Sequencing Scaffolds: 4
• Novel Protein Genes: 6
• Associated Families: 5

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	2
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	1
All Organisms → Viruses → Predicted Viral	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Hot Spring Microbial Communities From Five Geothermal Springs In Yellowstone National Park, Usa
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Five Geothermal Springs In Yellowstone National Park, Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → hot spring → spring water
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Norris Geyser Basin, Beowulf Spring, Yellowstone National Park, USA
• Coordinates
  • Lat. (^o): 44.7315
  • Long. (^o): -110.711361
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F006070	Metagenome / Metatranscriptome	382	N
F011233	Metagenome / Metatranscriptome	293	N
F026309	Metagenome / Metatranscriptome	198	Y
F026924	Metagenome / Metatranscriptome	196	Y
F027904	Metagenome / Metatranscriptome	193	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0051076_100381	Not Available	1929
Ga0051076_100772	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	1319
Ga0051076_101174	All Organisms → Viruses → Predicted Viral	1481
Ga0051076_101221	Not Available	2477

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0051076_100381	Ga0051076_1003812	F026309	MSLPAPLSNPNLFIGLVVFIVASILLYLGRIPLSAWTTIVGVLLGYYFGYQHALLKERRTSE*
Ga0051076_100772	Ga0051076_1007722	F026924	MSVGKVCRREHYRFEASKIVHLGWHSFHMPVIVYGHDPDPGKAQGDLCINVDGFYEPIGSFRENNLILSPMMGVKVEDVGESK*
Ga0051076_101174	Ga0051076_1011742	F026309	MSLPAPLSNPNLFIGLVVFIVASILLYLERIPLSAWTTIVGVLLGYYFGYQHALLKERRTSE*
Ga0051076_101221	Ga0051076_1012212	F027904	MEKYEPPEYDLFNLNNGGTAIGTTPAPLLYEGQANAAVIVPPDLTLRVKQVVIQNATASLITVQLLAVSTVSGAPTPVAKTPPIPVPASSAVTLDEDEWSISVKSGYSLAAVSSVANSANVFVKAYFVKGTGSPI*
Ga0051076_101221	Ga0051076_1012214	F011233	LAIPWFLPFVKGWRYHVPQLQTQLLSGIPVSFTGTYTVLNGEFPGYFVSAAIGTTDPNFITRASADGLTVIEVTVGDLRDARVYRNQMGEPNILSYASYIRGFPLPVYALSLSGDGLPFYQSIKIEVVPRNQPALITGFAANIIEIYDVDLFKESVKEFFESITPSTSTVPTSSSFVAEEVVSAKLPVKVT*
Ga0051076_101221	Ga0051076_1012215	F006070	MTLYPYLVVDLPITDTNTHTYRTNPFNPLTPTQPGISLVRLGESVPPIRAFNIYVYNYANAALSVQVIANENAKNYQYGAFLDGLDYQSESGYPDFNVGSPFTVPAGSTSAPSVEAIQSDFYTSAAERYLSLALTYSTAPSAGFVRAHIDLFYGGV*