3300003075: Coral viral communities from Mount Irvine Bay, Buccoo, Tobago - healthy corals

Overview

Basic Information

• IMG/M Taxon OID: 3300003075
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0059069 | Gp0051328 | Ga0051126
• Sample Name: Coral viral communities from Mount Irvine Bay, Buccoo, Tobago - healthy corals
• Sequencing Status: Permanent Draft
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 720487
• Sequencing Scaffolds: 6
• Novel Protein Genes: 7
• Associated Families: 7

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1
All Organisms → Viruses	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	1
Not Available	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → environmental samples → uncultured gamma proteobacterium HF0070_03O15	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Coral Viral Communities From Mount Irvine Bay, Buccoo, Tobago, From Healthy And Bleached Corals
• Type: Host-Associated
• Taxonomy: Host-Associated → Cnidaria → Unclassified → Unclassified → Unclassified → Coral → Coral Viral Communities From Mount Irvine Bay, Buccoo, Tobago, From Healthy And Bleached Corals

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus

Location Information

• Location: Mount Irvine Bay, Buccoo, Tobago
• Coordinates
  • Lat. (^o): 11.183496
  • Long. (^o): -60.816715
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F006772	Metagenome	365	Y
F008031	Metagenome / Metatranscriptome	340	Y
F045994	Metagenome / Metatranscriptome	152	Y
F048238	Metagenome	148	Y
F051901	Metagenome	143	N
F085720	Metagenome	111	Y
F100979	Metagenome	102	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0051126_10131	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	670
Ga0051126_10168	All Organisms → Viruses	654
Ga0051126_10172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	653
Ga0051126_10173	Not Available	652
Ga0051126_10434	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	567
Ga0051126_10660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → environmental samples → uncultured gamma proteobacterium HF0070_03O15	506

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0051126_10131	Ga0051126_101311	F048238	MGTKNVHLHYCQIADEHCPLAITRFTSFDLDDKPLAVEQVTYESNMDYMERQVINALRCNVEVSILTSTPIHEFKRLHHIFNCDK*
Ga0051126_10168	Ga0051126_101682	F085720	MAHYAFLNNDATTGTLREELSVLYTEMGNLTSIEEPNEEDTAAIEAKQAGIDAKQQEIDNALCVVTGVITGVLETYXXICKR*
Ga0051126_10172	Ga0051126_101721	F008031	MASYTAEKGAILQPGNQINRLSSYNTEGVYGWPGFELYEMVGYVKVDNLSADKADNKSFNLTVPSPDRRSSDRVRDDRTSLVVQADADRPAYIYSASIAIGQDIPSAGEPSYPATPLTADIDGTNTEILLFGPDNSGSPYGVPATQANGLAAATAITTAFSSGTIAQGCAACI*
Ga0051126_10173	Ga0051126_101732	F051901	MTPPPKVNFTKAAADMARADYLDELFLKDGRDQVSHPLHGTYTGLYQMYTLQKLG*
Ga0051126_10434	Ga0051126_104341	F006772	MPQPKSGRQIIMERLNKAIQLATTADLQRAAMFLEGAREVRKGSRRQRTNARSAQATAWKKKVDDSITW*
Ga0051126_10625	Ga0051126_106251	F045994	MSKTLLTDEIVKEQLEQDGIMEEPDAPWLLEYINTEYGSKLDNTTDWVDNKNMLKIYSESTADSYDIYWCTHDERPYVCQDGYYYEDYTXXVRSSNTRISIWL*
Ga0051126_10660	Ga0051126_106602	F100979	MVKLAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMQEKTN*