3300002769: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample LVWS1_TP2_13L

Overview

Basic Information

• IMG/M Taxon OID: 3300002769
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0111355 | Gp0095197 | Ga0047378
• Sample Name: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample LVWS1_TP2_13L
• Sequencing Status: Permanent Draft
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 1019616
• Sequencing Scaffolds: 2
• Novel Protein Genes: 2
• Associated Families: 2

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater → Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine hydrothermal vent biome → marine hydrothermal vent → hydrothermal fluid
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline)

Location Information

• Location: Marker 113, Axial Seamount, Northeast Pacific Ocean
• Coordinates
  • Lat. (^o): 45.922741
  • Long. (^o): -129.988104
  • Alt. (m): N/A
  • Depth (m): 1522

Associated Families

Family	Category	Number of Sequences	3D Structure?
F054846	Metagenome / Metatranscriptome	139	N
F082613	Metagenome / Metatranscriptome	113	N

Associated Scaffolds

Scaffold	Taxonomy	Length
LVWS1TP213L_10204	Not Available	591
LVWS1TP213L_11571	Not Available	624

Sequences

Scaffold ID	Protein ID	Family	Sequence
LVWS1TP213L_10204	LVWS1TP213L_102042	F082613	LDAQLNQQSVVVAGPNATTKDAGIYATKIISVTTSASASNILIGHTNVGFAPWKVIPSRGVSSTTGASIGIDGTANITLQTTFANIADNAIFAGTFDVFSHSYLAALTASAFDTVDTREIGVRLKFNSWSSGNVRLDLSVSAKG*
LVWS1TP213L_11571	LVWS1TP213L_115712	F054846	RESRKSLSEHDTARKPERVPMYAQRTMIDTTLIPESYHGHWVSNNPAGRIDMLLRAGYDFVTKDQNVYSSHVTENGVDSRVSKSGSDGVTLYLMIIPLELYEADQEAKAEKAKEQTGTIFGKQRNDPDFFSRDENGRDTPASRGIGRVTTNDFVL*