3300002340: Wastewater treatment Type I Accumulibacter community from EBPR Bioreactor in Madison, WI - H_11min_Aerobic no depletion (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300002340
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0055735 | Gp0057359 | Ga0004984
• Sample Name: Wastewater treatment Type I Accumulibacter community from EBPR Bioreactor in Madison, WI - H_11min_Aerobic no depletion (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 1916174
• Sequencing Scaffolds: 1
• Novel Protein Genes: 1
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia cenocepacia	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Wastewater Treatment Type I Accumulibacter Community From Ebpr Bioreactor In Madison, Wi, Usa
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Wastewater Treatment → Wastewater Treatment Type I Accumulibacter Community From Ebpr Bioreactor In Madison, Wi, Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Madison, WI, USA
• Coordinates
  • Lat. (^o): 43.078418
  • Long. (^o): -89.386482
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F023044	Metagenome / Metatranscriptome	211	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
JGI24209J29981_11637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia cenocepacia	574

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI24209J29981_11637	JGI24209J29981_116371	F023044	FDFSAIFAQLQEVAAALAQQALGQVVGSLAGLIGGRASVDLAAIFNGFLADITGAVTGIGQHLLNQGLAAVLGGLGSLGGSRFLGDLLSSLSSQIGSAVTAAQGALSGALGSLGALGGNILDASKPHWEQLQEQLVGHGLNVLGSLSETINNLHGSITGGR*