3300001933: Marine microbial communities from Moorea, Cooks Bay - GS048a

Overview

Basic Information

• IMG/M Taxon OID: 3300001933
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0055716 | Gp0055242 | Ga0016855
• Sample Name: Marine microbial communities from Moorea, Cooks Bay - GS048a
• Sequencing Status: Permanent Draft
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 666592
• Sequencing Scaffolds: 1
• Novel Protein Genes: 2
• Associated Families: 2

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Marine Microbial Communities From Global Ocean Sampling (Gos)
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine → Marine Microbial Communities From Global Ocean Sampling (Gos)

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine biome → intertidal zone → sea water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Moorea, Outside Cooks Bay, Polynesia Archipelagos
• Coordinates
  • Lat. (^o): -17.475834
  • Long. (^o): -149.81223
  • Alt. (m): N/A
  • Depth (m): 1.4

Associated Families

Family	Category	Number of Sequences	3D Structure?
F004325	Metagenome / Metatranscriptome	443	Y
F027869	Metagenome	193	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
GOS2263_10031	Not Available	1874

Sequences

Scaffold ID	Protein ID	Family	Sequence
GOS2263_10031	GOS2263_100312	F027869	MEHKKAKKAKKMAEQAMELMALEDAMAEANEADLQPEDGYINPMGRIGTVPPSTYSLGNMLNGTTTQSVINPET*
GOS2263_10031	GOS2263_100313	F004325	MKKKKSTTEKADQFLSGLGTAGGAIGSPQLMGFGGTDIQNQVMSGNMDEYANIRMRQDEIKIGESAAMPPDLDASYLKLNLPGSPLPVNGLLAPQNIIGAQQTQDMIRSEEQMF