3300001880: Termite hindgut microbial communities from the Max Planck Institute, Bremen, Germany, analyzing fibers in the hindgut lumen - ASSEMBLED Fiber-Associated Metagenome

Overview

Basic Information

• IMG/M Taxon OID: 3300001880
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0098774 | Gp0055733 | Ga0016888
• Sample Name: Termite hindgut microbial communities from the Max Planck Institute, Bremen, Germany, analyzing fibers in the hindgut lumen - ASSEMBLED Fiber-Associated Metagenome
• Sequencing Status: Permanent Draft
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 369323497
• Sequencing Scaffolds: 8
• Novel Protein Genes: 15
• Associated Families: 15

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	6
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes → Cryptotermes secundus	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Termite Hindgut Microbial Communities From The Max Planck Institute, Bremen, Germany, Analyzing Fibers In The Hindgut Lumen
• Type: Host-Associated
• Taxonomy: Host-Associated → Arthropoda → Digestive System → Hindgut → Unclassified → Termite Hindgut → Termite Hindgut Microbial Communities From The Max Planck Institute, Bremen, Germany, Analyzing Fibers In The Hindgut Lumen

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut

Location Information

• Location: Max Planck Institute, Bremen, Germany
• Coordinates
  • Lat. (^o): 53.109695
  • Long. (^o): 8.847543
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000011	Metagenome	7286	Y
F000022	Metagenome	6021	Y
F000028	Metagenome	5420	Y
F000050	Metagenome	3273	Y
F000113	Metagenome	2145	Y
F001390	Metagenome	708	Y
F003940	Metagenome	461	Y
F005256	Metagenome	407	Y
F010799	Metagenome	299	Y
F023745	Metagenome	209	Y
F030479	Metagenome	185	Y
F074132	Metagenome	120	Y
F075029	Metagenome	119	Y
F085849	Metagenome	111	Y
F090568	Metagenome	108	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
FAAS_10263996	Not Available	515
FAAS_10365289	Not Available	532
FAAS_10439577	Not Available	524
FAAS_10445471	All Organisms → cellular organisms → Bacteria	550
FAAS_10472720	Not Available	505
FAAS_10614478	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes → Cryptotermes secundus	541
FAAS_10634180	Not Available	503
FAAS_10769846	Not Available	517

Sequences

Scaffold ID	Protein ID	Family	Sequence
FAAS_10057303	FAAS_100573031	F000113	MKSEVYKEKVNTRDELVARIMNSAALIKQERQDDLWRATRTIAKRGEKCIEVDGGIFEHLL*TVAIY*DHLHNK*
FAAS_10263996	FAAS_102639962	F005256	MEHPFLMFLDQQNDAAQSVGLLWTSDQLVAETSPDNTRHSQQTN
FAAS_10365289	FAAS_103652891	F003940	YDISSLKVNDLTLILLSGENGELLIKPANSLWDLIRALKG*
FAAS_10365289	FAAS_103652892	F085849	MGTVSCHNGLSVNGARGSKMFAQPLSMGKEPDAIPHPLLMQTLPTLLKTLGN*
FAAS_10365289	FAAS_103652893	F010799	MYHCPLLFFGANEIGSVHVYGKKLITEMDYQGHTCT
FAAS_10369889	FAAS_103698893	F000022	MLHTFRFSLQNAVYFIMLPFLVPILFIFYIQGVLKFKC
FAAS_10439577	FAAS_104395771	F001390	VLVLNNAIFYAFIMRLTVEERVFILESYLKKMSYAHCRQSFFEKFRILKMNITRVTEEINERTLRKVARNMVKRVDKCIEMNGHHFQ
FAAS_10445471	FAAS_104454711	F090568	MYYTNEFIDELETKVQLDKVMYANIQAHNVAKMLADDRTMYKMFGVYWWNVKDALRKHVNNKEWYCGVKDEPLMKERGWHGSDFRTMLAAMYYMNEHKVITSDHEWF
FAAS_10472720	FAAS_104727201	F075029	MGSPVFGFSDLPIIGENRCLRKLVNKTEGNKFVTMKHSKGLRLHLTEN*
FAAS_10572589	FAAS_105725891	F000028	ACLKYSVLIVAEKIYKMQHLEGSGTPVLHIGRTVLKG*
FAAS_10614478	FAAS_106144781	F030479	MGEGEVCTGFWWGNLRERDHWGDPDVDRRIILGRIFGKWDVDVWTGWIGTEG
FAAS_10634180	FAAS_106341801	F023745	PHVYVNQRLEIQFRAPDDERYAARNMLSLQSTLE*
FAAS_10693006	FAAS_106930061	F000050	MTYKAKVAVCSQIHTKHSTQSKHHVEFFIVKPGVT*
FAAS_10741888	FAAS_107418881	F000011	LVVVGPAGRPGHDQQHCYHYAPTVKPEAATTVVELLMMSVRTPETC*
FAAS_10769846	FAAS_107698462	F074132	VHHRTIQINHQPDATIFQFIILTFIYSSTCFGRFPAHHQELNDCSG