3300001760: Wastewater microbial communities from Belvaux, Luxembourg - M40

Overview

Basic Information

• IMG/M Taxon OID: 3300001760
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0099419 | Gp0055293 | Ga0012994
• Sample Name: Wastewater microbial communities from Belvaux, Luxembourg - M40
• Sequencing Status: Permanent Draft
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 31943412
• Sequencing Scaffolds: 10
• Novel Protein Genes: 14
• Associated Families: 14

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1
Not Available	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Wastewater Microbial Communities From Belvaux, Luxembourg
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Belvaux, Luxembourg

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Belvaux, Luxembourg
• Coordinates
  • Lat. (^o): 49.506095
  • Long. (^o): 5.943536
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F015738	Metagenome / Metatranscriptome	252	Y
F021262	Metagenome / Metatranscriptome	219	N
F025938	Metagenome / Metatranscriptome	199	Y
F033819	Metagenome / Metatranscriptome	176	Y
F033857	Metagenome / Metatranscriptome	176	Y
F037272	Metagenome / Metatranscriptome	168	Y
F041512	Metagenome / Metatranscriptome	160	N
F043669	Metagenome / Metatranscriptome	156	N
F045118	Metagenome / Metatranscriptome	153	N
F045124	Metagenome / Metatranscriptome	153	Y
F058179	Metagenome / Metatranscriptome	135	Y
F058560	Metagenome / Metatranscriptome	135	Y
F088842	Metagenome / Metatranscriptome	109	N
F105193	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
CSTRM40_1000451	All Organisms → cellular organisms → Bacteria	2548
CSTRM40_1000479	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	2188
CSTRM40_1000994	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	7447
CSTRM40_1001793	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3180
CSTRM40_1003817	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	2720
CSTRM40_1004691	All Organisms → cellular organisms → Bacteria	2723
CSTRM40_1006488	Not Available	2823
CSTRM40_1007120	Not Available	1591
CSTRM40_1007678	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	1692
CSTRM40_1008948	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1525

Sequences

Scaffold ID	Protein ID	Family	Sequence
CSTRM40_1000451	CSTRM40_10004516	F045118	NSSQEFCVYDKLQEMREHGLETSELPETMRFEHRALKKEKVRSLYGFTRVSELFHGGYEVVKEKQVESWKNSLFSFSAEEVVVLGSKQLEQEMKVFQERFGSNWFQYFLRSYGAYSLAKFAGKEVVRAALENLNSERTKVWRTMKLLEEAERELLVLKQEEGSSKTLGELYEELRGKVCELAGRN*
CSTRM40_1000479	CSTRM40_10004795	F015738	VPESDRPPAVMWSRVDTGLYQELEDAIREVFPGESDRVRLAAVEVWGVVMNRVPESGRVEGASWCRHFDRPIDHRLVKEDRPACIEERHGCGNCPESTYRVRRVPDR*
CSTRM40_1000994	CSTRM40_10009942	F037272	MTGKQIMRIHTANGVEEIDADRLIVEGDEYVLFQGEEEVRRVPIADILSETDPETGEEAGGIETIYSRS*
CSTRM40_1001793	CSTRM40_10017932	F033857	MVEIIDLSTVSPAPVIVRIGNGDEIEEIDLTIVPARGTLLLSEATQRHGGWDKIPDDEMIPAIAAICRQSNPRITAEWLETKLTRPQLAGLTQVILAQAFRPWGNQKKDDKEQDAGEKNR
CSTRM40_1001793	CSTRM40_10017936	F045124	MSDDSTLRAMIYETRQDVRWIKDTLKEIKESNQARDELIAEIKARQDQQIGRDSALAVVISAIVAFFTALASGGWFR*
CSTRM40_1003817	CSTRM40_10038174	F058179	MIGTEDLALLVWLTFIAVGVVCIYTILADAATLSMTGTCTGQGFTNITVEADLLLVSINQTANGTTWQIWGAPA*
CSTRM40_1004522	CSTRM40_10045222	F105193	MTAFTLSLDYDYPTALLEPDGDGQPRQINLVIDWRDAVISAETRAHDDNTQSEYRWRGMEDAYPLPPLVDATRLREWVEEEVLPRALPLLEAYETVWEDIEQFGRFPGHEDEKQDFDAWMDRIEPPLHDGGLWPVVDWLSGGVEEVGPGTTDAAIEELADTIVDEAAAENVVLVGGREAVRAYLLDYRQDLQDAIPEPDRYEIRGYEVVEKVAKPSGTTARVWVPKSWE
CSTRM40_1004691	CSTRM40_10046911	F033819	SRVTNTAIQSQLIELSVRLTRMEKDIQEIKNNLSESGEKVSSLEKSEAGRYPLIERRLDNLEKRTDKHGNEIDELIKITQSLANTNKVLTWVAGLAGAGVLSWLIAQILSLIG*
CSTRM40_1004691	CSTRM40_10046914	F021262	MSKKYYIKFNTGKELTGTAKEIATQLRNESRLLAITPRKYAKLVAKSYEMSTGMKLRTWTYNSFVKSLGKSLMVMEFKEMK*
CSTRM40_1006488	CSTRM40_10064885	F041512	MEKDYRLIRDLDAYVRLRTKKDTAITLKLKDKIAQMNSDELHIAEVYYHQLLASDIRTLGEIGCIELAIELATWLYPRILREAYAERSKDYMLAH*
CSTRM40_1007120	CSTRM40_10071202	F043669	MDKLALQSLISKMSIATGEEYHLTESDKLAILSAFHKCEKWLIALQGEGVISVSEQDLEYLRDLADNVEGDINGKWSLDKPEYLAILITLQDYLNDIPCN*
CSTRM40_1007678	CSTRM40_10076781	F058560	MGKSDVRCPKCGKATNEVELIYPRTDDYEEKRVRAIICPHCLYVFSEPDDKKTNNSFRNEKQDIIKSD*
CSTRM40_1007678	CSTRM40_10076782	F025938	MVVIPDKIVDLLSAMFEDVRDKQFIIGDTLIEIVNATGDKGGTIAYLAGRLGVSASTLYDYYRIAKLWTPEYRAMYQALDWTIYRNADPNDPEDRALLDRCIDEQWSSATFKENKYPALKDPRVIVGRMIALGKRIYEQDTLEIEQREAILLAIRILQEIVHALENPEYLDVKF*
CSTRM40_1008948	CSTRM40_10089483	F088842	MKNDEGIAYGLIAVVMFIGMVALIFICFTPAMNGVIGAANDLIGDGKVGVQTAGAVEWGLGWFGAIPLIALLGIGYWAYIRALEESPSD*