Sample 3300001707

Basic Information
IMG/M Taxon OID	3300001707 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0094242 \| Gp0056353 \| Ga0012958
Sample Name	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Beebe Supr50
Sequencing Status	Permanent Draft
Sequencing Center
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300001707 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0094242 | Gp0056353 | Ga0012958

Sample Name

Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Beebe Supr50

Sequencing Status

Permanent Draft

Sequencing Center

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	24423628
Sequencing Scaffolds	42
Novel Protein Genes	46
Associated Families	45

Dataset Contents

Total Genome Size

24423628

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum	1
Not Available	30
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1
All Organisms → cellular organisms → Archaea	2
All Organisms → Viruses → Predicted Viral	2
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer → unclassified Microbulbifer → Microbulbifer sp. OS29	1
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED264	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus parasanguinis	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum

Not Available

All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus

All Organisms → cellular organisms → Archaea

All Organisms → Viruses → Predicted Viral

All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote

All Organisms → cellular organisms → Bacteria

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer → unclassified Microbulbifer → Microbulbifer sp. OS29

All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED264

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus parasanguinis

Ecosystem Assignment (GOLD)
Name	Hydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume → Hydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands

Ecosystem Assignment (GOLD)

Name

Hydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands

Type

Environmental

Taxonomy

Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume → Hydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine hydrothermal vent biome → marine hydrothermal plume → hydrothermal fluid
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

marine hydrothermal vent biome → marine hydrothermal plume → hydrothermal fluid

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Subsurface (non-saline)

Location Information
Location	Beebe Vents, Mid Cayman Rise
Coordinates	Lat. (^o)	18.35	Long. (^o)	-81.85	Alt. (m)	N/A	Depth (m)	4000
Location on Map

Zoom:	Powered by OpenStreetMap^©

Location Information

Location

Beebe Vents, Mid Cayman Rise

Coordinates

Lat. (^o)

18.35

Long. (^o)

-81.85

Alt. (m)

N/A

Depth (m)

4000

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F002745	Metagenome	533	Y
F002753	Metagenome / Metatranscriptome	532	Y
F003827	Metagenome / Metatranscriptome	466	Y
F004768	Metagenome / Metatranscriptome	424	Y
F005399	Metagenome / Metatranscriptome	402	Y
F005749	Metagenome	391	Y
F007140	Metagenome / Metatranscriptome	357	Y
F007697	Metagenome	346	N
F007771	Metagenome / Metatranscriptome	345	Y
F008913	Metagenome / Metatranscriptome	326	Y
F009237	Metagenome / Metatranscriptome	321	Y
F010325	Metagenome / Metatranscriptome	305	Y
F012125	Metagenome	283	Y
F012582	Metagenome / Metatranscriptome	279	Y
F013191	Metagenome / Metatranscriptome	273	N
F013649	Metagenome	269	Y
F013943	Metagenome	267	Y
F016015	Metagenome / Metatranscriptome	250	Y
F022430	Metagenome / Metatranscriptome	214	Y
F023123	Metagenome	211	Y
F035337	Metagenome	172	N
F036269	Metagenome	170	Y
F037766	Metagenome	167	Y
F039182	Metagenome	164	Y
F043455	Metagenome	156	Y
F046425	Metagenome	151	N
F047174	Metagenome	150	Y
F053340	Metagenome	141	Y
F054930	Metagenome / Metatranscriptome	139	Y
F054945	Metagenome / Metatranscriptome	139	N
F054946	Metagenome / Metatranscriptome	139	Y
F055180	Metagenome / Metatranscriptome	139	Y
F056681	Metagenome	137	Y
F059068	Metagenome	134	Y
F062842	Metagenome / Metatranscriptome	130	Y
F062843	Metagenome	130	Y
F063198	Metagenome / Metatranscriptome	130	N
F076187	Metagenome	118	Y
F076188	Metagenome	118	N
F078613	Metagenome / Metatranscriptome	116	N
F080147	Metagenome	115	Y
F080155	Metagenome	115	Y
F081450	Metagenome	114	Y
F097524	Metagenome / Metatranscriptome	104	Y
F101353	Metagenome / Metatranscriptome	102	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
supr50_100109	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum	6590	Open in IMG/M
supr50_100620	Not Available	2779	Open in IMG/M
supr50_101251	Not Available	2098	Open in IMG/M
supr50_101443	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1963	Open in IMG/M
supr50_101522	Not Available	1926	Open in IMG/M
supr50_101819	All Organisms → cellular organisms → Archaea	1784	Open in IMG/M
supr50_101851	Not Available	1771	Open in IMG/M
supr50_102114	All Organisms → Viruses → Predicted Viral	1670	Open in IMG/M
supr50_102879	Not Available	1457	Open in IMG/M
supr50_103217	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1378	Open in IMG/M
supr50_104250	All Organisms → cellular organisms → Bacteria	2229	Open in IMG/M
supr50_104937	All Organisms → Viruses → Predicted Viral	1107	Open in IMG/M
supr50_105963	Not Available	1514	Open in IMG/M
supr50_106436	Not Available	959	Open in IMG/M
supr50_106458	Not Available	957	Open in IMG/M
supr50_106505	Not Available	953	Open in IMG/M
supr50_107122	Not Available	900	Open in IMG/M
supr50_107275	Not Available	889	Open in IMG/M
supr50_107556	Not Available	869	Open in IMG/M
supr50_107662	Not Available	862	Open in IMG/M
supr50_108063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer → unclassified Microbulbifer → Microbulbifer sp. OS29	1581	Open in IMG/M
supr50_108077	Not Available	833	Open in IMG/M
supr50_108176	Not Available	827	Open in IMG/M
supr50_108802	Not Available	790	Open in IMG/M
supr50_109508	Not Available	749	Open in IMG/M
supr50_109569	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED264	1365	Open in IMG/M
supr50_109645	Not Available	743	Open in IMG/M
supr50_109937	Not Available	1059	Open in IMG/M
supr50_110011	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
supr50_110632	Not Available	696	Open in IMG/M
supr50_111003	Not Available	1219	Open in IMG/M
supr50_111445	Not Available	660	Open in IMG/M
supr50_111467	Not Available	659	Open in IMG/M
supr50_112619	Not Available	612	Open in IMG/M
supr50_113281	Not Available	587	Open in IMG/M
supr50_113340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus parasanguinis	585	Open in IMG/M
supr50_114640	Not Available	539	Open in IMG/M
supr50_115345	All Organisms → cellular organisms → Archaea	516	Open in IMG/M
supr50_115407	Not Available	799	Open in IMG/M
supr50_115495	Not Available	511	Open in IMG/M
supr50_115569	Not Available	508	Open in IMG/M
supr50_115772	Not Available	502	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
supr50_100109	supr50_10010911	F054946	LAFLYNSDYERWVPHPPQNFAVGFSEAPQLPQDEDVCLVSDDFGLGL*
supr50_100620	supr50_1006201	F039182	MMKWMLIIVLAALSLNGCADTADAEDSTAITPVDNQESTDSSTDSSGETIWIAIVMTWNPVNRTIDKEFTTEVACWNYYEGSVGEGKFGSQVLDHQDNPPTKDFNVGPDHLEFPIRIYRGKDGQGQIWLTCDIKGRYKDL*
supr50_101251	supr50_1012513	F046425	MKLIIDEGCFKIYYRDPDTTGNRLFLSTRTATVMDAVAEFNLIKGGFDTPLRVERYNTEGKLTDVFNMDGRYDVPRRKDNAYSLEFTMRMGI*
supr50_101443	supr50_1014437	F076187	VIICPDGLVSVAIKHFFEFISTEKFFENFKTSRNVKSFPNIPLIPDTDIFNASNLDTLFINSERK*
supr50_101522	supr50_1015223	F097524	MFENDNLYLPVAERRPFVNVQLKTSETISAAETHLGPQ*
supr50_101819	supr50_1018195	F004768	MKKATIEILEEGETIFGSRTGGNYMVREYEDGEEMGGSFFKTIEEAETYVREYQQSELV*
supr50_101851	supr50_1018511	F054945	MWTNTPEVMKYTVLEFPAHDYYDCVDVAEEINDIENAYKSETAYVRSFYWVYNNMLDEIKAECVYAEPTATPPKWFKEYTRKQWLEKHE*
supr50_102114	supr50_1021141	F101353	TFKQYVKEAQAPFNTRSMIFVNYESPALILSSTMIDRIFGQTKVDAWHVTDLDGLKGLKRIEGKKSSISVLTDIEPGRVKIFTKGVETGGGYCVSLEGSLLVSADFDIYSERLEGGRRAIAIGSEDYPNLYKDMIKMQDKMWNKYGEKGKLDAGQDFNKLGNSLTQKQKGQFVKEWIDNCESILTKNKKAQEELRKFGRSDWSTYNESVINQIKIKRIYVINDNKLERFGKSYELAKKEFKDVIEVTSKRMGEIIKK*
supr50_102879	supr50_1028792	F047174	ETLDDELVGARKAKLKSAFGKSSKGKISSRQLLNKFVALVA*
supr50_103217	supr50_1032171	F043455	MRKETVEEYLRRGKTITKIPQVLDTIGSIWNQQGIGADKDRHDHKKFGIRLQDWKSMQPDIRFDTEDDDRKYWNQLNKRCDKLIKKINKEQKKT*
supr50_104250	supr50_1042501	F053340	MIEVLVFGMVVLSVICLWLLIEGRKSPKFLIWFIPLLLILVSSTYETYTSILGYPRTSTP
supr50_104937	supr50_1049372	F080155	MVNTYLSLDYISIVLFGLILVLFSIGSFYLSNVDKDNNEER*
supr50_105963	supr50_1059634	F012125	MSDTRYSVMLPVGGKYSFFSAGKPKNLPRFYFLVLAGIFLMIFMFLWFD*
supr50_106436	supr50_1064362	F005399	MKMAIELDVFQEMKLEENTGEIVMRPMAEMMDTPLDYIDEEDEPEWTPLLKVLTETIIDPYIVPASTEIPNEKDYHMIVAASEDLIKVAGDFAKKVEGLHTIDPKEYQERMKRFEQGTFWPTEEQKMHMEEHGSGPDEER*
supr50_106458	supr50_1064581	F005749	MKKSWLLIMSFDEHDGSSNEIKTLYHGKTKRNMVKTMDLFQDMNEHLVLALVEIDKKSTYDKIIDKEDSEEMFFMDSKRNWNNGKTYEDLKEEALEEIIMGSLINGEMGYA*
supr50_106505	supr50_1065052	F007697	RVNASLSQKFGAKVYGVGNPNISGPELDAKKLVSETGYFQIKFGMNGRQVMETIAKQVENVPDHIETVVGIAGSGLSMLGVAMGCKLYNKNVKTIYPVALSNYVYKNKKMWYDRFNDRHKFDGDFKVVQSDYPYQYKLKLDESLPLDQTYEAKAWDWMVKNLEPSEKVLFWDVGIKEYDLDYIEPIKWHKSEYEKTLDREVRRKTKVTEHDFF*
supr50_107122	supr50_1071223	F076188	MSDVRKVLILDHRDIKTLAKHKYAELAYTTDAMLDLWNEIVDQILEG*
supr50_107275	supr50_1072751	F062843	PSKNTHAQIREQAHWVPPDPKTVHKRFCQGREDANRYANSLQEQGYHTIIKQDNGGY*
supr50_107556	supr50_1075561	F022430	MSDIHYENRQLALWAEYDDLKGRVSFEAFMERHVNVNAYIVNLLNKFGTVSAEIDRSESAKRFAEMDLVQLGD*
supr50_107662	supr50_1076621	F036269	QTIHLRRLRIFKLMGVKMKKSPIDSIIIDLILEHYNMQSIDHREPVLTDNEFDDIVIYAQEVYYKKIMDETPIGIEGEA*
supr50_108063	supr50_1080632	F023123	MKMDRNYFKEKHTGKKSKGSHTKCCGQDKDRHILNKNKKDEWEMIERHCEDHLTHYSSVKDITPICCKVCGRLLEYRCTLDKESYYNKNTIDTK*
supr50_108063	supr50_1080638	F008913	NGNVLWTCDNCDRTAEVSWPDTNAVALLCTCDGHVHPQCNNDWYYQGLYWNRIPMENRERYVKARRKN*
supr50_108077	supr50_1080772	F013191	MIIVIGNGQSKSISDFNLFKKHITYGCDFIYRKFIPNHLVCQDIDAQLELITNGLTKKYKCYFRGFDLIPSMHYDTLKQTTDKRLKIGENQPKTDNFIQFAHEGIMYFIWIDSSDPTENIAWWSDTTFEEWVSDTVTLRLACQQNPSETFFYCVGFDYYHDQTKDGIFLGSSITEFHDEKQDSWIGQHKHIEEEYPNS
supr50_108176	supr50_1081762	F035337	MEYKKLPVEINWNEEDQATIDIICDACEKRYIILTNDISNLELCSFCGHYLEVSTEDIHEFQEDSWD*
supr50_108802	supr50_1088024	F037766	LEILQEGEKVFGHTTGGKYFVQEFEDDMPRGGQFFNTIQEAEKYMVEYETGDEADTKVLLQEDA*
supr50_109508	supr50_1095082	F013649	MSSILEKTLSILERLPSSRRMREHDEAGKRSKKFKKLRKEHFREDWDADLWD*
supr50_109569	supr50_1095693	F055180	MMKFKEYLQVNADDSIEQIMSGEWIQKSRSTWKATDDEDNKIEIHNDGHDPELNGESWTVHTNTFILQNSS*
supr50_109645	supr50_1096451	F016015	MINVNKFENRIVKFKRIDSAGNESDKEAEVRRMDYNQAEDIPRSVTARLVDPLNFVITLGYDKSKKKFSGPLGTDIWESNFDIDDFIESSKMGIADRYMKSPKRNRARF*
supr50_109937	supr50_1099371	F002745	KSKRKKERRMKSFKQYLREFAQQSTSDYVFNLGYDSSSLKIPISGPMFKRIWPDTIRTTVFHTTDLGGLANLKKLEGGKKSISAFFSMMSRYMETGVATGDDVHVVVEMDADVLVSARDDIMSEVDKQGRRWVMMSWFEYQTRERSKFSKVEKDLNTLIANLVKKHIPKDKEIQQTKHFGKDSGAVFDIWGNMKRHLKGDGQKLRLVIKDYFDGVEKVIKKNKEVLGNIFYGYAKSKRMTDNSNSWDEQIVNNIDIYKIHVIKPHPSSDVWGPDEIKQHITDVHKWPMKVWDVAIDLEIYTREVVNAEIRTMGGWSKK*
supr50_110011	supr50_1100113	F080155	TYLSLEYISIVLFGLILVLFSIGSFYLSNVDKDNHEER*
supr50_110632	supr50_1106322	F078613	MTTLCQFAYVTPLHKVMHWDDINKRRTLCYQGKYETCTTCDRGIAQIHDYTYGIYTSSGDKSIRYLSTALSSHTNFQTIFRDYLKANTNPCDLLFQIRKGDIVTPKGYETKGYEIEVMEDEPFVAEADRPSPFQEGKWAIPRMVAEALLDIDGHPMNLLDLYTEMKERFPNIEDRDIKEYAILLGEGGVVDLRNAKEKEWAI*
supr50_111003	supr50_1110032	F054930	MTKEKKKLRMVKNGEGGGVPTPVSKLDDTELSSLSTGKYKVFTNGAEEKDLKGKYLAVNTDHLVSVFPMEDKTVLFSSGGNSWTVAEDFATVIKRLNADI*
supr50_111445	supr50_1114451	F012582	TMLHWAEDNKTQRKEIEGIAGDYEIPQRNGVDWKEDFKFVTKLDRMLSSDIGDKLKKKEMKMCNKLYRYYGSVYDPV*
supr50_111445	supr50_1114452	F081450	MTQFEEKSCKVLGVIIFLLVVMTWLQISGCYSPPQPEMEGEPFPDYIDEVEMKNLA*
supr50_111467	supr50_1114671	F007771	METIIHAKNIDKKVRLALYGMLHHSATKLFPRRMKYVSIKLHLKHYVYDGVAMIEEDTKITNPRNFKIIIDPYRLEKDDWGRERNYSEWVSELLRTLAHEMVHVKQYIMSELTFKKGQMCWKKQKVDYKSGDDYYRSPHEGEANGLERWLQLGYIASWNKIEE
supr50_112619	supr50_1126193	F003827	MPEGRWADWQVRLIAENLAEKCPKRAWFEDDNDNEDYFTSLKSWSHITARQLYSMELEERQLIIFVHHLGIEHVGVETFDPQDKGR
supr50_113281	supr50_1132812	F063198	VEITKLYIVRMRLEENSLISEDRLILNAPSKIRINRVKVVNTGATEARSSGDVYPNPLGPIRNPSIIRNNTSGMFVRRNNASDKKPKIAIKLNASNAVLTFKILGEF*
supr50_113340	supr50_1133401	F002753	VNNTVSDRFTPAAFEIESVNNTVSDRFTPAAFEIESVKLTVSDRFTPATFDIESVKLTDSDRFTPATFDIESVNDTDSVRFTPATFDIESVKLTDSDRFTPAALDVSSVNDIDSDRFTPAVFEIESVNDTDSVRFTPADFAIESVKLTVSDRFTPATFDIESVNDIDSDMFTPAVFEIESVNDTDSVRFTPATFE
supr50_114128	supr50_1141283	F062842	MKWIYIIVIAVALSFSGCADTADAEDSTATTPAEQQENTDKEVSDDETWIAVVMTWNPVKRVIDKEFTSEVECWNF
supr50_114640	supr50_1146402	F009237	VNKRLTKLKGLIDDGTVPTILEIRTNSREYSYEDVIALDYGFIQDLYMGNEQFETWFTYIGPEPIKFNDLTLNKNEMIEIILNYYEKL*
supr50_115345	supr50_1153451	F013943	PTGTDSGLGIITGDAWPDGLYTKRGERRYVGPASLSRGMQQIDFPASDNIYGGPDSLNNERRAKRDAGKLYKYLSDPDGHSEVKANELRDDTPPLSPKQRIYGIHGFHRKQEYTIPPESANFHSTSETLIKPTTPPEGTKSGGIPATPEPGSKEMGSASGYRQAQKGGESIF
supr50_115407	supr50_1154071	F080147	MTANQMIAALEAVKVEEYVEEVLEDMSEDDLYCNFRLNGDLFDFRETDKTKEFNDHREDYSIDTCVDNIVRV*
supr50_115407	supr50_1154072	F007140	MSKKNVPIDLTGTYEEAMTALDEADITDEFKDHQYHKVFDDLGQMISLEPPTGIPSWVKLT*
supr50_115495	supr50_1154951	F059068	MLGQHYIDEEDMYLSECCFARPFGELDMSSARYGGPSGFCSRCLDNCIFLVEDMGEPFDTKE
supr50_115569	supr50_1155691	F010325	LQLAVERLKSSIVVPVDQGDVGTPYGIIIQQLQQIENQIDNVINLIQLEED*
supr50_115772	supr50_1157721	F056681	MNGGIYTLRLKLSDFLNDPLEHLVVDKIHEIYKIQNFKLQLWYDEEDLTPTDLKSFIEKYESLLHYKTTIRPNRTRDFTQFTWYNIIHKDDKVIDFPLRFQYEHES

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001707: Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Beebe Supr50

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences