NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300001332

3300001332: Hypersaline viral communities from Bras del Port, Santa Pola, Spain



Overview

Basic Information
IMG/M Taxon OID3300001332 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0069917 | Gp0054897 | Ga0011177
Sample NameHypersaline viral communities from Bras del Port, Santa Pola, Spain
Sequencing StatusPermanent Draft
Sequencing CenterLifesequencing S.L.
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size118104459
Sequencing Scaffolds1
Novel Protein Genes1
Associated Families1

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameHypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Hypersaline Samples → Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain

Alternative Ecosystem Assignments
Environment Ontology (ENVO)aquatic biomesaline evaporation pondhypersaline water
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Hypersaline (saline)

Location Information
LocationMediterranean Sea
CoordinatesLat. (o)38.2Long. (o)0.6Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F066493Metagenome126Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
CR30All_1000502Not Available603Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
CR30All_1000502CR30All_10005023F066493MSEREWHDGVVDVADELVQEHSAEGAIEHLQTRRQSSSEQLQQRCTEAIAYIRREVLADE

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