3300001278: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY75

Overview

Basic Information

• IMG/M Taxon OID: 3300001278
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0085351 | Gp0055730 | Ga0012513
• Sample Name: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY75
• Sequencing Status: Permanent Draft
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 1573782393
• Sequencing Scaffolds: 22
• Novel Protein Genes: 24
• Associated Families: 20

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium	2
All Organisms → cellular organisms → Bacteria	2
All Organisms → Viruses → Predicted Viral	3
Not Available	9
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Gramella → unclassified Gramella → Gramella sp.	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Macroalgal Surface Microbial Communities
• Type: Host-Associated
• Taxonomy: Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Surface (saline)

Location Information

• Location: Botany Bay, Sydney, NSW, Australia
• Coordinates
  • Lat. (^o): -33.966629
  • Long. (^o): 151.166614
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000256	Metagenome / Metatranscriptome	1448	Y
F001217	Metagenome / Metatranscriptome	745	Y
F004866	Metagenome	420	Y
F010834	Metagenome / Metatranscriptome	298	Y
F013088	Metagenome / Metatranscriptome	274	Y
F017135	Metagenome	242	N
F017557	Metagenome / Metatranscriptome	240	Y
F025150	Metagenome / Metatranscriptome	203	Y
F025969	Metagenome / Metatranscriptome	199	N
F028441	Metagenome / Metatranscriptome	191	Y
F033796	Metagenome / Metatranscriptome	176	N
F038193	Metagenome	166	Y
F049001	Metagenome / Metatranscriptome	147	N
F053218	Metagenome / Metatranscriptome	141	Y
F053312	Metagenome / Metatranscriptome	141	N
F059990	Metagenome / Metatranscriptome	133	Y
F065671	Metagenome / Metatranscriptome	127	N
F091844	Metagenome / Metatranscriptome	107	N
F092050	Metagenome / Metatranscriptome	107	Y
F103255	Metagenome / Metatranscriptome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length
BBAY75_10039028	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium	2179
BBAY75_10042383	All Organisms → cellular organisms → Bacteria	2074
BBAY75_10049290	All Organisms → Viruses → Predicted Viral	1892
BBAY75_10055107	All Organisms → Viruses → Predicted Viral	1771
BBAY75_10075172	All Organisms → Viruses → Predicted Viral	1465
BBAY75_10076010	Not Available	1455
BBAY75_10083643	Not Available	1372
BBAY75_10128931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1051
BBAY75_10155364	Not Available	937
BBAY75_10171452	Not Available	881
BBAY75_10175027	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	870
BBAY75_10177718	All Organisms → cellular organisms → Bacteria	862
BBAY75_10181941	Not Available	849
BBAY75_10234202	Not Available	728
BBAY75_10237784	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	721
BBAY75_10240644	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Saprospiraceae → unclassified Saprospiraceae → Saprospiraceae bacterium	716
BBAY75_10263767	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Gramella → unclassified Gramella → Gramella sp.	677
BBAY75_10277705	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6	657
BBAY75_10301791	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	625
BBAY75_10398956	Not Available	533
BBAY75_15160832	Not Available	518
BBAY75_15163467	Not Available	554

Sequences

Scaffold ID	Protein ID	Family	Sequence
BBAY75_10039028	BBAY75_100390283	F028441	MTLKQLIKLEDKAKEVWVVSPTLHYDVDNKAFSEIVSVNLGQKTKYRYIVPHTATVIKNITTYKAKYGVSEAEIRENFLILPASEFNPFITECAIYDAKDRKKCVAVAAPATDNSNEAIKFNDKTSKAMARSYKALWKKYKRTNL*
BBAY75_10042383	BBAY75_100423833	F028441	MTIKQLIKLEDKAKEVWVISPTLHYDTENKDFTELVSVNLGEKTKYRYIVPASRTVAKNLKVFKKTYKVTDAEMQKIFCILPESEFNPFIQEIAIYNASNECVACAGSSTEDTNDVIKFDQAHAKDMAKAFKSIWRKYKLTNP*
BBAY75_10049290	BBAY75_100492904	F017135	MIPIISCPLPGGGQALIKTQDIGGATTGKNPKECDVYILGWAANGITVDLSLDDFAEVWVSALIDDGEPEYEVVFTPDEVH*
BBAY75_10055107	BBAY75_100551072	F103255	MKLTADILQELSIYINLNYEDDWYLQEKVNELKTKIYEQ*
BBAY75_10059155	BBAY75_100591552	F091844	SVARFGRVGGRARVGAIEGTAGALLTEPLYYGLSRDQQLDYTMGEALLNVGAGLFLGGAIGTVGGMLTRADVDAEAVVRASEPEAPVRTDVVPIELPPRMTEAEAMAKADRVVKQTREMYGITGGRVTYETAVRQFVTDQGINVAMVLPKAVARPQTLSEYIRARGGINDQDPTFRGELKNLGIEGRAGYVNSKGNMVNGISNTKTDTNLDDAAEMAFEAGFLPERSTNALIDALSEESRGNFTFARQDMEKADAWRTYSASKDDFEAELSRRADIRAELEEQGVRDITDEEIALVSEEMSRNNIDATSAFESVTGRVQDMQSEMAARHGLDIQNDPLADFDAAARFDRIGDDIELDEPIAQEEAIIAQMREDGELTPDQIKQLDEIEQIDAQAQAYVEVTEAVTVCVARS*
BBAY75_10075172	BBAY75_100751721	F001217	SKTKFNGFEKYFIQTALRHAIEEVTDVLATESAGKRSLYAPGYFTSVGNEIIDKVNSMTLKKYQD*
BBAY75_10076010	BBAY75_100760102	F004866	MAIVNKVDLKMQVDIDVSIKYQILTYCFFNDILISNSDLKFLAELSKNSGIELTKFCVAVVEKGIFKSPQSARNAITKAEKKKLLSKIGNNKKTISLNNDLNVQINGLVLLDYKILGSESKES*
BBAY75_10083643	BBAY75_100836432	F053312	MSYKVLNDAVGLIRDETPMWEGSYQELPDKTKDGLICLWLITHPTWMDDIFPHTVSDKPLLALEAIYSEDATSRMAAAMFRDAADRNAKDVDNDAYLSEALDDFEDILDTPDFLEEIRHQIYLYLEPSMEELVMDSFLHLNHLDRLVMGSH*
BBAY75_10128931	BBAY75_101289312	F065671	MTEPAFMAFAIFSSLSVCEEFVEYYDLERIFEPQCVQMGGAPEYQLPIPNIRPMPRPEVADD*
BBAY75_10155364	BBAY75_101553641	F049001	KSILILIAFVLSLNMFSQEPTLLYMNSDWNHKNDYIFLKSIKGVKILEVDYDSQPDKFKEAIKSVPAIILFDKNKKLKKIWQAGLTMKLTVDPKDIQKAINELNK*
BBAY75_10171452	BBAY75_101714521	F000256	ADGVSGIGSAPFNVGSEIHQQSQTRERIEAHLTEQRVAKEHRANHTHLEALREQKLDLGKGYDRFGAKTTADRPQGTNINIEV*
BBAY75_10172673	BBAY75_101726732	F038193	VQASFSSPPNLSSAAYAAIXLWVKSASGALLTMQVKATIEPRSDRSRPVCYAFTRANGDAQIFAYVALDIRLFILRDAPSGKTVRIKPADFTRQAMDDSIESMLG*
BBAY75_10175027	BBAY75_101750271	F053218	YVYTGTQTTDRTNLFTLTSFAISNVVTFEISEIVRDYILNTFDGDYATDNVWVDYRTTSYIQGSAQTPSAYTQLTGFDSYGFYEDGANPQNDSGLLQSNTKVVKLDDAPATIPVYTEITNRVSYELDGELVYTKAITDSNESDEQIEYVTNTINGSDEFEDRVIQDGGTFEGSSCLDQFANEFTLFDFDTIYIDTDDEVIKLTVDNIEECKYDPYKITFVNKFGALQDLWFFKRTIRYKQTPTKDTN*
BBAY75_10177718	BBAY75_101777183	F013088	MDEKNKKALWIPEELHKDIKIFAIQNNLTIEQATQMLIKLGMVSYESEKGNDSV*
BBAY75_10181941	BBAY75_101819413	F010834	MNELTLSLTLPKTISLNALYAGKHWTFRKKTKDEYKKIVEAELARYDHHFAESMSIHIRYNTRADVDNLVLVSKFTADTLVANEWIADDSPKYYHKLTITYDQSVEKNYCEVEVRLKL*KRLTN*
BBAY75_10234202	BBAY75_102342022	F000256	MADGVSGIGSAPFNVGSDIHAQTRVRERIETHLVEQRVAKEHRANHSHLEALAKQRFDLQETYDRFGTKTNADRPQGTNINIEV*
BBAY75_10237784	BBAY75_102377841	F092050	MQLSEDCWIEINSQTLPINVSSSSLNYKTHLNDKLINYTIEIDFAF
BBAY75_10240644	BBAY75_102406442	F028441	AKEVWVVSPTLHYDTENKDFSELVSVNLGEKTKYRYIVPATSTVAKNMKAYKKMYNASEEEMNNNFLLLPASEFNPFLEETAIYDASTNCVACCAPPTEEGNDVIKFCEATSKNMAKAYKALWKKYKRTNP*
BBAY75_10263767	BBAY75_102637673	F017557	MKGQTHGGKGSAQRKTDSKKFAANWDAIYNKNTTKSSKKKK*
BBAY75_10277705	BBAY75_102777051	F033796	NKTYKVAGVHCGKKGVTVLDGKHRELEEAEQSAKYLSGKYALENSLGITNFVAFNTHALTMLPPYSIDMEAEWNYVVEQEGEDTPSVEINRQIGGSI*
BBAY75_10301791	BBAY75_103017912	F025150	QTEGRDISKYSSFIDECIMSLFPEDATYDIYFEVKKFVDKDGSHAGFCMGDDIESVISLATHWVYEDGEEIAYEPHELAANIAHELVHAKQFYRGQINMVDNVWKHNNVNIDCDTIDYEDLPWEVEAYAYEVILTDLLWENV*
BBAY75_10398956	BBAY75_103989561	F059990	LADKKITQLTNITGADLANGDEFVVVDITADETKAITFDELKTAFDTGTGFVRVTGDTMTGALNVESTITSGGMIVDGDVTFGDNGKA
BBAY75_15160832	BBAY75_151608321	F025969	MWTALLLLCSVEGKCFAFGGPVMQSESQCIQSIPIGLKYAQQMFPAYRA
BBAY75_15163467	BBAY75_151634671	F025969	MWTALLLLCSVEGKCFAFGGPVMQSESQCIQSIPIGLKYAQQMFPAYRAMDYQCVQWGEGA*