3300001265: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY84

Overview

Basic Information

• IMG/M Taxon OID: 3300001265
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0085351 | Gp0053823 | Ga0012459
• Sample Name: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY84
• Sequencing Status: Permanent Draft
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 1227405394
• Sequencing Scaffolds: 7
• Novel Protein Genes: 7
• Associated Families: 7

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae	1
Not Available	3
All Organisms → Viruses	1
All Organisms → cellular organisms → Bacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Macroalgal Surface Microbial Communities
• Type: Host-Associated
• Taxonomy: Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Surface (saline)

Location Information

• Location: Australia: Botany Bay, Sydney, NSW
• Coordinates
  • Lat. (^o): -33.966629
  • Long. (^o): 151.166614
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F009787	Metagenome	313	Y
F012678	Metagenome / Metatranscriptome	278	Y
F018540	Metagenome	234	Y
F082762	Metagenome / Metatranscriptome	113	Y
F088352	Metagenome	109	Y
F091615	Metagenome / Metatranscriptome	107	N
F093339	Metagenome / Metatranscriptome	106	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
BBAY84_10005214	All Organisms → cellular organisms → Eukaryota	3692
BBAY84_10034417	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae	1407
BBAY84_10070247	Not Available	949
BBAY84_10096872	All Organisms → Viruses	792
BBAY84_10132892	All Organisms → cellular organisms → Bacteria	661
BBAY84_10210428	Not Available	509
BBAY84_15154824	Not Available	501

Sequences

Scaffold ID	Protein ID	Family	Sequence
BBAY84_10005214	BBAY84_100052143	F093339	MVLSNDLFNAIANKLKLKTSLLNEERLYVENLLNKIDHLKKLREDNYKTLSVKKTTYQKNIENDTNLIVMYIISISFLKANTTIHVSDVKGNIKLFYSAGSVGLGGKQKKKRLIAVSKLISLMLKKAIFLGKKPVALHLNNVNFYNSLIVNKLKKSLYIKVIKSFNQTPYNRLFWEQEVMCSNHIISNLYPFF*
BBAY84_10034417	BBAY84_100344172	F082762	MLDLILRSSPYLFPGGRALKLVKNGVNTINSTNPLILTKNITLTVLDCCAPPPLRLAAHCVGVGALITASVVSPNPVTVGSAIHLVTEIYEQC*
BBAY84_10070247	BBAY84_100702471	F018540	MDRNRLAWWDNFNEELYCNYLTQKDEKMNTYRILYKTYKGNNTDAPVVQAVKYVQAYDKAEARKLFDLWKGLIISIDKV*
BBAY84_10096872	BBAY84_100968722	F009787	MKAIYLICVLTLFSCSAKYHYNKALKRGLEVIKTSDTIRITTIDSVPVIKHDTIVYEHFYTQKDTIVFYKNIEIPKTRLETRIEYKLKRDTIKMITRVEVQKAKADGKKNKKPNYWLMLIFVCVFGGVVFIASKLVNKYL*
BBAY84_10132892	BBAY84_101328922	F012678	MLNQHSLEEIADIHNLLEDIKKEYNYGIKPILINHSPSRFKNPHTVPKLKKIQINRGLGLAAQSTNILKKNIP*
BBAY84_10210428	BBAY84_102104281	F091615	MSKDYFNTLPSGYIEYVDKIMGNLVVGAHKGPEFSDDWDIRLDDLNGNPIFSINGENSYPIYRVNYNPSAFLFNMVPMGGEGEQLEFLTQVYEKYNLERLIYDFFEKKNM
BBAY84_15154824	BBAY84_151548241	F088352	TSLETGNTVFRTIETQDQLEKFRELEGYDITVMPVVHSSEEVCVACEG*