3300001203: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY85

Overview

Basic Information

• IMG/M Taxon OID: 3300001203
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0085351 | Gp0056494 | Ga0012576
• Sample Name: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY85
• Sequencing Status: Permanent Draft
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 984156678
• Sequencing Scaffolds: 7
• Novel Protein Genes: 7
• Associated Families: 6

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Nitzschia → Nitzschia ovalis	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Haslea → Haslea avium	1
Not Available	2
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Peronosporales → Peronosporaceae → Phytophthora → Phytophthora ramorum	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Macroalgal Surface Microbial Communities
• Type: Host-Associated
• Taxonomy: Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Surface (saline)

Location Information

• Location: Botany Bay, Sydney, NSW, Australia
• Coordinates
  • Lat. (^o): -33.966629
  • Long. (^o): 151.166614
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F024806	Metagenome / Metatranscriptome	204	Y
F028441	Metagenome / Metatranscriptome	191	Y
F038196	Metagenome / Metatranscriptome	166	Y
F046726	Metagenome / Metatranscriptome	151	Y
F094641	Metagenome / Metatranscriptome	105	Y
F100465	Metagenome / Metatranscriptome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length
BBAY85_10001654	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Nitzschia → Nitzschia ovalis	7878
BBAY85_10001925	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7316
BBAY85_10014579	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae	2380
BBAY85_10020217	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Haslea → Haslea avium	2006
BBAY85_10086572	Not Available	914
BBAY85_10213173	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Peronosporales → Peronosporaceae → Phytophthora → Phytophthora ramorum	545
BBAY85_10215279	Not Available	542

Sequences

Scaffold ID	Protein ID	Family	Sequence
BBAY85_10001654	BBAY85_1000165413	F046726	LGRITEQERIEIIQRGFQLQADSKISLKKYYESTRQYSLFQLKGYSIKYETVRRTKLYQQLAKENKN*
BBAY85_10001925	BBAY85_100019255	F028441	MTLKQLIKLEDKAKEVWVVSPTLHYDTENKDFSEIVSVNLGEKTKYKYIVPASKTVLKNIKLYKKMYNVTEADISENFLILPESEFNPFLEETAIYDASTKCIACCAPATEDSNDVIKFNATTSANMAKAFKALWKKYKRTNP*
BBAY85_10014579	BBAY85_100145794	F100465	LLHTFFQKNASEAWNLVSMDFIDLCPAIMSLLVGFNFSNIDVVLATVQYGNPNFYRPSMSVTSKVQSHVVRNKVLFLNVGRDFGSNFGTLTLAYKIMDKYYSIVIHFDGTSVIVLNEYNHLQAGSREIVIEKGEEEGSVNPGGGGTIMTWSREEEGDGIEFDFDSPF*
BBAY85_10020217	BBAY85_100202173	F046726	LSNLSEEERVEIIKLGFQLQAEGKISLKKYYESTQEHSLLQLEGYSIKYETIRRTKLYQQFKR*
BBAY85_10086572	BBAY85_100865721	F024806	MITNSNFNFTENPSIVLELPFSEHIEELRQRIFLLGWIILILTCLAFIEVKS
BBAY85_10213173	BBAY85_102131731	F094641	QSNSERPGSDLYSVKWDGKELKQLHDRLCFTPRSVADMSPLETARAVDALMFLSEKRDGTIKGRMVYNGKPTRAWLSREESASPTAALESIFLTAIVDAKEERDVMSNDVPNAFIQTPLPPTPKDSPRVMMKITGVLVDLLVEMAPEIYGPYVVYQRGRKVLYVEVLRALYGQLFASLLW
BBAY85_10215279	BBAY85_102152791	F038196	MENLIETLRNRKTGYGHFNISIEMDGKELSTTTTNTMAIDAAFDDCYDDEDNDGRYYESRFKAQEALVNEILRANDIEM*