3300000977: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY70

Overview

Basic Information

• IMG/M Taxon OID: 3300000977
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0085351 | Gp0056453 | Ga0011750
• Sample Name: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY70
• Sequencing Status: Permanent Draft
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 859331921
• Sequencing Scaffolds: 5
• Novel Protein Genes: 5
• Associated Families: 4

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Siphonostomatoida → Caligidae → Lepeophtheirus → Lepeophtheirus salmonis	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Macroalgal Surface Microbial Communities
• Type: Host-Associated
• Taxonomy: Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Surface (saline)

Location Information

• Location: Botany Bay, Sydney, NSW, Australia
• Coordinates
  • Lat. (^o): -33.966629
  • Long. (^o): 151.166614
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002829	Metagenome / Metatranscriptome	527	Y
F028441	Metagenome / Metatranscriptome	191	Y
F052608	Metagenome / Metatranscriptome	142	Y
F059045	Metagenome / Metatranscriptome	134	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
BBAY70_10000030	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	146103
BBAY70_10002834	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7671
BBAY70_10110884	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	891
BBAY70_10246726	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Siphonostomatoida → Caligidae → Lepeophtheirus → Lepeophtheirus salmonis	513
BBAY70_12479908	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	548

Sequences

Scaffold ID	Protein ID	Family	Sequence
BBAY70_10000030	BBAY70_100000306	F028441	MTLKQLIKLEDKAKEVWVISPTLHYDVENKEFSEIVSVNLGEKTKYRYIVPATATVEKNIKLYKSMYKVSAKDIATNFLFLPVSDFVPFFTECAIYNATSKTPVALAAPATDDSNEIIKFNKKTTKAMVRAYKALWKKYKRTNP*
BBAY70_10002834	BBAY70_100028343	F028441	MTLKQLIKLEDRAKEVWVVSPTLHYDVENKDFNELVSVNLGQKTKYRYIVPATSTVKKNMGLYKKMYNLTEEEMFNNFLLLPASEFNPFVTEVAVYNGSSKSPIAVTAPAREDSKDVIRFKKASAVQMAKEFKSLWKRYMRKNP*
BBAY70_10110884	BBAY70_101108842	F059045	LAADEIPKEDTVALLAELADPEDEDGFFPYTPFIDRLTGKA*
BBAY70_10246726	BBAY70_102467261	F002829	ADEWVKKVETLVKEWQLLDSTVTELNSWVADDRAKETEQQFSLEKMESTLGELKNIFKEKEKLVENL*
BBAY70_12479908	BBAY70_124799081	F052608	KIFGDSKSTIENLYKSIQENYDIMTMTLPDDKKDFVKKEVKAITEKLECVGKFEEKVKKIEDFVENLKEFDNSLKGMDKWMTDSEQQLKDIKDSSDKMTPEDRVSYTMELQEDVGSKVRLIEELIKKEEGLLPQGDKVPQDAEDFKIELKRIHDFVKELQKKVMTECDNFSEDVKYWAEYKT