3300000513: Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin

Overview

Basic Information

• IMG/M Taxon OID: 3300000513
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0047444 | Gp0054484 | Ga0011563
• Sample Name: Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin
• Sequencing Status: Permanent Draft
• Sequencing Center: McGill University
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 11176345
• Sequencing Scaffolds: 3
• Novel Protein Genes: 3
• Associated Families: 3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Predicted Viral	1
Not Available	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Hydrocarbon Resource Environments Microbial Communities From Canada And Usa
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Fort McMurray in northeastern Alberta, Canada
• Coordinates
  • Lat. (^o): 57.01116
  • Long. (^o): -111.6
  • Alt. (m): N/A
  • Depth (m): 0 to .1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F003471	Metagenome / Metatranscriptome	485	Y
F041590	Metagenome	159	N
F090293	Metagenome / Metatranscriptome	108	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Draft_100950	All Organisms → Viruses → Predicted Viral	2078
Draft_103736	Not Available	1127
Draft_104702	Not Available	955

Sequences

Scaffold ID	Protein ID	Family	Sequence
Draft_100950	Draft_1009501	F090293	PVLDLFVNYGNLDLSMQMQRPAESGLFFNLVNRSSTMSERTPTAKRSIAPVTVTVEITATRINENGTLSGITAKVVKQPIKGNEFKTSVPPMAGGAIYLKALSLDGLQIVSDDAPKAVGAKVKLF*
Draft_103736	Draft_1037363	F003471	MSEYKQPQPVPVPNTAGYPNNVPNTQTKVKRGTGAAVRGKHYSKNSQ*
Draft_104702	Draft_1047021	F041590	MNTYLITLTRTKVADVPAPLPMHTRIDTRTRKPESRAFTIDIPTSALPDTSTVPAQFRPLVDSALLDACEQTLNTFVTSKATAGNMQIPVGLFDLEKLLTATAQRRMTAALLIGMWRNSSKYVLEVAPKLTSQTGSALLRYQANIEKHEKRLAALTGKNPELNMSAEDLDKLMVNLTEADSETPYGEYLAQRTEEVRSKLVEDSEAL*