2236876018: Saline water concentrator pond microbial communities from Bras del Port saltern, Spain - SS33

Overview

Basic Information

• IMG/M Taxon OID: 2236876018
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0050867 | Gp0052555 | Ga0011263
• Sample Name: Saline water concentrator pond microbial communities from Bras del Port saltern, Spain - SS33
• Sequencing Status: Permanent Draft
• Sequencing Center: GATC-Biotech AG, Konstanz, Germany
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 219035789
• Sequencing Scaffolds: 2
• Novel Protein Genes: 3
• Associated Families: 3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → environmental Halophage eHP-30	1
All Organisms → Viruses → environmental samples → uncultured virus	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Saline Water Concentrator Pond Microbial Communities From Bras Del Port Saltern, Santa Pola, Spain
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water Concentrator Pond → Saline Water Concentrator Pond Microbial Communities From Bras Del Port Saltern, Santa Pola, Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → saline evaporation pond → saline water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Location: Spain: Bras del Port
• Coordinates
  • Lat. (^o): 38.11
  • Long. (^o): -0.36
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F062484	Metagenome	130	Y
F072017	Metagenome	121	Y
F076468	Metagenome	118	N

Associated Scaffolds

Scaffold	Taxonomy	Length
SS33_p0279325	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → environmental Halophage eHP-30	542
SS33_p0943507	All Organisms → Viruses → environmental samples → uncultured virus	508

Sequences

Scaffold ID	Protein ID	Family	Sequence
SS33_p0279325	SS33_02793252	F062484	MWLIGSKTDIETYIAKVDKAEGFTGNLTKSWAEPRKHPDKDLYACPKNESVEPDSQLTEKEELPED
SS33_p0736880	SS33_07368801	F076468	TKAVWLSGRYWRRESKVVHIDGDCDQLDSCDNPRGPVDPSVLQPDMAVCKRCDPTEPDQYGGSGTSLAHRLRHGDLQDATIDSDSVGGDE
SS33_p0943507	SS33_09435071	F072017	WENRNMSLNQTPSLESQGDTNLKSTVHKHDEIHAVTQEQIDVLTANDRLLDFYEWQQII