Sample 2140918001

Basic Information
IMG/M Taxon OID	2140918001 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0045212 \| Gp0051966 \| Ga0026282
Sample Name	Hot spring microbial communities from One Hundred Springs Plain, Yellowstone National Park, Wyoming, USA - OSP_D
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Basic Information

IMG/M Taxon OID

2140918001 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0045212 | Gp0051966 | Ga0026282

Sample Name

Hot spring microbial communities from One Hundred Springs Plain, Yellowstone National Park, Wyoming, USA - OSP_D

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	51518426
Sequencing Scaffolds	22
Novel Protein Genes	31
Associated Families	22

Dataset Contents

Total Genome Size

51518426

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	16
All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → Ignisphaera → Ignisphaera aggregans	1
All Organisms → Viruses → Predicted Viral	2
All Organisms → Viruses → Adnaviria → Zilligvirae → Taleaviricota → Tokiviricetes → Ligamenvirales → Lipothrixviridae → Alphalipothrixvirus	1
All Organisms → cellular organisms → Archaea → TACK group	1
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → Ignisphaera → Ignisphaera aggregans

All Organisms → Viruses → Predicted Viral

All Organisms → Viruses → Adnaviria → Zilligvirae → Taleaviricota → Tokiviricetes → Ligamenvirales → Lipothrixviridae → Alphalipothrixvirus

All Organisms → cellular organisms → Archaea → TACK group

All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D

Ecosystem Assignment (GOLD)
Name	Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa
Type	Environmental
Taxonomy	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Ecosystem Assignment (GOLD)

Name

Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Type

Environmental

Taxonomy

Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → hot spring → spring water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

aquatic biome → hot spring → spring water

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Water (non-saline)

Location Information
Location	One Hundred Springs Plain, Yellowstone National Park
Coordinates	Lat. (^o)	44.7315	Long. (^o)	-110.711389	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

One Hundred Springs Plain, Yellowstone National Park

Coordinates

Lat. (^o)

44.7315

Long. (^o)

-110.711389

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F011233	Metagenome / Metatranscriptome	293	N
F018029	Metagenome / Metatranscriptome	237	Y
F021133	Metagenome / Metatranscriptome	220	N
F026309	Metagenome / Metatranscriptome	198	Y
F026924	Metagenome / Metatranscriptome	196	Y
F027904	Metagenome / Metatranscriptome	193	N
F031931	Metagenome	181	N
F042427	Metagenome / Metatranscriptome	158	Y
F056742	Metagenome / Metatranscriptome	137	Y
F061983	Metagenome / Metatranscriptome	131	Y
F063848	Metagenome / Metatranscriptome	129	N
F070317	Metagenome / Metatranscriptome	123	Y
F075084	Metagenome / Metatranscriptome	119	N
F076262	Metagenome / Metatranscriptome	118	N
F076263	Metagenome / Metatranscriptome	118	Y
F076264	Metagenome / Metatranscriptome	118	Y
F077499	Metagenome / Metatranscriptome	117	Y
F077502	Metagenome / Metatranscriptome	117	N
F080245	Metagenome	115	N
F085905	Metagenome	111	N
F087444	Metagenome / Metatranscriptome	110	Y
F087445	Metagenome / Metatranscriptome	110	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
contig00631	Not Available	6385	Open in IMG/M
contig01294	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → Ignisphaera → Ignisphaera aggregans	2876	Open in IMG/M
contig01518	Not Available	2456	Open in IMG/M
contig01593	Not Available	2344	Open in IMG/M
contig01681	All Organisms → Viruses → Predicted Viral	2245	Open in IMG/M
contig01722	Not Available	2190	Open in IMG/M
contig01951	All Organisms → Viruses → Adnaviria → Zilligvirae → Taleaviricota → Tokiviricetes → Ligamenvirales → Lipothrixviridae → Alphalipothrixvirus	1956	Open in IMG/M
contig02534	All Organisms → Viruses → Predicted Viral	1568	Open in IMG/M
contig02682	Not Available	1500	Open in IMG/M
contig02712	All Organisms → cellular organisms → Archaea → TACK group	1496	Open in IMG/M
contig03122	Not Available	1316	Open in IMG/M
contig03379	Not Available	1241	Open in IMG/M
contig04683	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	959	Open in IMG/M
contig04810	Not Available	937	Open in IMG/M
contig05662	Not Available	825	Open in IMG/M
contig06255	Not Available	775	Open in IMG/M
contig06416	Not Available	749	Open in IMG/M
contig07453	Not Available	681	Open in IMG/M
contig08156	Not Available	630	Open in IMG/M
contig08578	Not Available	594	Open in IMG/M
contig09247	Not Available	563	Open in IMG/M
contig09692	Not Available	545	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
contig00631	OSPD_00695660	F076262	MSLNPVIKGSYTLAAPQTVSVAASSSSSVSISFTPLGAGELYVYIALPSEVTATISIGGQSVSLSNGGNQFIIPANTPIGNITINNSNTSAVSVVVWALFIEVA
contig00631	OSPD_00695670	F021133	MKTVTMQLRRFVKWNPMTRWQIFSATDCIIGTANTHLALKIAKEKGYPPDVIEYLENQSRQEQWHCQLQIGKPPKPYDFVVAQKHREILLKHGIYVWMGVMQLLGEKIALAKAICWRRNDDPHFVNKFATVDEYYHTTYPLLLLSKYASEEELEKIVELQKEYIVNIFKIKEGI
contig01294	OSPD_00262630	F026309	MSLPAPLSSPNLFIGLVIFVVASILLYLGRIPLSAWTTIVGVLLGYYFGYQHGVSVSKGG
contig01518	OSPD_00547250	F018029	MNLWQIIRKLQEKDELDEEEMRDLIDYLNVLKEGLQKLRIILYMDYLGYIGDFDVIFKKPWFFSEVRLKCLSLDEECGFLYLDDFIWRLATGGIEVKPFIREVTHP
contig01593	OSPD_00646710	F085905	MEEKLSFPSSKLTQFDYVAMNAYWLNVRLKYFTDPMLYAVATGIWVINLMDDVDIAETGTQKDFEYGLIYVYSNSRVDTLFIVALTHYFNVKREREYYRSIPMDALQSVMKSLVDFMNDKLKILDKLKEKIDERVVLMMWNQLYVFVMGFLYGLYGRDAEAVFQGVVARHLLPYSVLEVIRRHTRK
contig01593	OSPD_00646720	F063848	VAKKRRSVHDPTLSVIHYQEQLEKMAKAYEQSASRRNQRAVNGFAILKQVQQTVSDYLNEVSEAMKKPIVAQLRVEFLGIAMAFLKASNEGLNSYALTGRMAQIATLKATDIIHTTTLTCAEVGEIINGMLKKLSGVTADPLTFTEDDGICEATVANPLTKLSVASASTGYTVSLTDILKAKTPEEVLMAK
contig01593	OSPD_00646750	F087445	LLNMSEYDLKRVFKMIPIDKRLMLALDTIQEYQNLRSKFDNLFNAFAMNSPKVKEVMENAKKNRKPLDRLADMFMDLIETMLKSKAMTLTDEDREKLREKVREMIESEE
contig01681	OSPD_00761420	F085905	MEEQLSFPSSRLSQFDYVGMNAYWLNTRLRYFTDPMLYAVATGIWVINLMDDVDIAETGTEKNFEYGLIYVYSNSRIDTLFIVALTHYFNVKREREYYRSIPMDALQNVMKSLVDFMNDKLKILDKLKEKIDERVVLMMWNQLYIFVMGFLYGLYGRDAEAVFQGVMARYLLPYSVLEVIRRHLKK
contig01681	OSPD_00761450	F061983	LKKYVFKVKVVQIKLINEEGVLSEQEFEHVKKTRIYKGMKVLEIKDLGFDSFWRFTHYYELVAVSEGGGLFNCYYGDVIDVEKLKDVGAIVVKESDGEPLRTMKTLVAKWYNKKLVEEEKAYEVCNTFVT
contig01722	OSPD_00813010	F087445	MSTASSKPTDELVQRLLNMSEYDLKRVFKMIPIDKRLALALDTIQEFQSIQNKFSNLLNGLAMNAPRVKEVVENARRNRKPMERFVDMIMDMVETMLKSKAMSLTDEDREKLREKVKEVMESEE
contig01722	OSPD_00813040	F076264	MSAISSAIQSLVNGLQSLFVALIDVFSNAVNAIGNTLASLANPIGYLVGVLAVFGSLISIIYYVFRGKGGVGGLVSGIRSVFTSFF
contig01951	OSPD_01101530	F070317	MSAMEELKELNLERIVKDAQEGEVCVVNKILKGKLTDLMPLIKDPATLSQKAMEFIQSRGDDIFYLFQCTTRGGRNVKLLVRQSFDPRSTFYQLMKKYKTIKVGDEVNVFYNPEKRRYDFLL
contig02534	OSPD_00569400	F076263	MLSAEDLSAILDDLEDLCARIPDGVTFHPTLEIRRHHANEEATYIKFDCRDHKYTLTIVRNGVAKTTRVSSREQLYRRLFPEYSPGYSGSYTEELWGGK
contig02534	OSPD_00569430	F080245	VIFVWSARVIIPGFRDEVFVSPALINRYAELTEDVYEVGMFMVPHKGHALLFLPTMVIKVDDELMKNLEQTSIEDLNIPLNTISNVFT
contig02682	OSPD_00762680	F077502	MVNQGTDVAHIILWIEKNLPEEGKLSELIDNIFSLITEIILNNLSQGKQPISFESVREIADAFKEIVYRSIEQSIGVLTEDVKEQVD
contig02682	OSPD_00762690	F070317	MSAMEELKELNLERIVKDAQEGEVCIVNKILKGKLTDLMPLIRDPANLSQRAMEFIQRRGDDIFYLIHCTTREGRNVKLLVRQSFDPKSTFYNLMKKYKSIKVGDEINIFYNPEKRRYDFLL
contig02712	OSPD_00802540	F087444	GVIYVYLVKAGFGTFVFATFDDGYSEYAHAIETLVARPALVTKPFVNVAKTIWDLLEQAEREFYDPFINNPFTQLLHDNETRTELIVTVRKLLESGE
contig03122	OSPD_00042150	F076264	MDLYAVGGMSAISSAIQNMVNGLQNLFVALIDVFGNAINAIGNTLASLANPIGYLVGVLAVFGSLIAIIYYVFRGRGGVSGLIGGIRNFFTSFF
contig03379	OSPD_00360490	F056742	MFVVEVEKVYGVKIESCEEFCKFYVLFLSVAEMLYGKHYNYAIFKAIMRGRPNLYACIKCNSVLTAEESIVHTLQHMKQLGYNPLAYNENI
contig03379	OSPD_00360500	F077499	IFVFPYESLKAVGYPKITNSEIIYILTITIPIGGHPDAGSPMDEKMRFLSTYMPLEFQKLQYMKAIDRALDILKYSLYSREDNVLFEIANKINGIYDVKELTNKVKDVECTKDLKQVDVTLTEAKRYIYPDLSLSKYASAQAKQLNMRKYEYYARVFQCYINQDKDLDMLTLFRVSNTVYNYIRLNNLSNLVKKIQFKNDRIAQLMEKIKQRVKITLEAMSDRRPVEPDVNVLNSITIRIKEIDLG
contig03958	OSPD_01110060	F031931	KSVYNALVQVYNEIRPFLTGVINFFSSLPAQLYNFASNIVTLVQQDMQDLVNIPIEVMKQEATRFGNAMPRVLGYNVANQSIFRMIDGLWRSRTSFKSKVTGTIATPFLAGLLGLFTEQMFKAFYPDLQTQGVQKYTPNKAIQSVTPPQLPSITQSDIQPLTPSSYTTTPASTTPPSASLVSSTIYPFKVADAMSIGLGLTATEGGVQLSKGYTNLYSQILAETDSAVFHAIIYSELAPLQSNTVIESITPVISLESLLKILQQQENIQLQLYGNVEQAVLPPGVTLCSPQSATNGSISGETVTENIDVQYASCLPPEELEFDEIDATPFLGVPPANQTDEISTNTYLGLPPVNQTDEIVVTYS
contig04683	OSPD_00763980	F026924	VSVVKICWREHYRFEASKIVHLGWHGFHVPVTVYGHDPDPGKAQEDLCINVDGVYEPIGSFRENELILPPEKGDKSGYVNDPC
contig04810	OSPD_00921550	F075084	VRPCRKDLCLLYSLGADYAKLIYFTNQNFQGRLFRAGARAMIYARRLMASWYGYDTGVLIETALRRILRRSITYCNIMRRLGLESEYCRRYTQYNGVPCDLVSVFTVETTYADILHMIVNYNSENVSKVLTKMTEMCSTYEVR
contig05662	OSPD_00735240	F076263	MLSAEDLSAILDDLEDLCARIPDGVTFHPTLEIRRHHANEEATYIKFDCRDHKYTLTIVRNGVAKTTRVSSREQLYR
contig06255	OSPD_00210600	F056742	LKLADCRYKCKQTYFRRSLFVRMFTSEVEKVYGVKVKSCEEFCKFYVLFLSVAEMLYGKHYNYAIFKAITRGRPNLYMCLKCNSTLTAEESVTHTLQHMRQLGYKPLTYNENI
contig06416	OSPD_00413600	F056742	LTVKLADCRYKCKQTYFRRSLFVRMFITEVEKVYQVKINSCEDFCKFYVLFLSVAEMLYGKHYNYAIFKAITRGRPNLYICLKCNSTLTAEESVTHTLQHMKELGYKPLTYNENI
contig07453	OSPD_00460810	F011233	LDYNWRVLAVAVPWFLPFVKGWRYHVPKLQRELLSGLPVPFTSEYTIINGQFPGYFVSAAVGTTDPNFITRASADGLTVIEVTVGELRDARVYRNQMGEPNILSYASYIRGFPLPVYALSLSGDGLPFYQSIKIEIVPRNQPALITGFAANIIEIYDVELFKESVKEFFESITPSSTLPVATSGVP
contig08156	OSPD_00092540	F042427	MTSKTVGINDSGGTPDSVSLPLTLPKCECICHENGGEPFSCGGMCWHPQLDASEYVIELVSSSNNIDHSVSLFAVYSAGKLKRIIFDSSNGLLKQFEVV
contig08578	OSPD_00626390	F076263	MLSAEDLSAILDDLEDICARIPEGVTFHPTLEIHRNYANEEATYIKFDCRNHKYTLTTVRTGVAKTTRVSSREELFRRLFPEYSPGYSGSYTEEFWGGE
contig09247	OSPD_00199630	F080245	MIFVWSAKVVLPGFNKEVFVSPALVNSYVQITEDVYEVGMFMVPHKGHALLFLPTMVIKVDDELMKNLEQTSIEDLNIPLNTISNVFT
contig09692	OSPD_00775730	F027904	PRTANSDLQGGLWRWYVVEQKYEPPDYDLFNLNNGSTSIGTTAVTLLYERQSNAAVYAPPDLTLRVKQVIIQNTTSSPITVQLLAVAAPNTTLPSPIPKTPPIPVNANSAVTLSEDEWSISIKAGYALAAVSSAANSANVFAKCYFTKGTGSPA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

2140918001: Hot spring microbial communities from One Hundred Springs Plain, Yellowstone National Park, Wyoming, USA - OSP_D

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences