NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 2124908031

2124908031: Obsidian Pool



Overview

Basic Information
IMG/M Taxon OID2124908031 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0054916 | Gp0052312 | Ga0010899
Sample NameObsidian Pool
Sequencing StatusPermanent Draft
Sequencing CenterHudsonAlpha Institute for Biotechnology, Oak Ridge National Laboratory
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size8362165
Sequencing Scaffolds1
Novel Protein Genes1
Associated Families1

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 11

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameHot Spring Nanoarchaeal Communities From Obsidian Pool, Yellowstone National Park
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Nanoarchaeal Communities From Obsidian Pool, Yellowstone National Park

Alternative Ecosystem Assignments
Environment Ontology (ENVO)aquatic biomehot springspring water
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationObsidian Pool, Yellowstone National Park, USA
CoordinatesLat. (o)44.6Long. (o)-110.433Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F021808Metagenome / Metatranscriptome217Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
OB25_ConsensusfromContig2362All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 1527Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
OB25_ConsensusfromContig2362OB25_00063590F021808MNEEPPYGTTAWFFYEIDEKQRQIYELVFDIEEKIAKIKDLLNEIDLLKAQLETNINVGK

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