2070309005: Wastewater viral communities from wastewater treatment facility in Singapore - IF-deduplicated data

Overview

Basic Information

• IMG/M Taxon OID: 2070309005
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0045482 | Gp0051727 | Ga0010907
• Sample Name: Wastewater viral communities from wastewater treatment facility in Singapore - IF-deduplicated data
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Illinois, Urbana-Champaign
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 60306652
• Sequencing Scaffolds: 6
• Novel Protein Genes: 6
• Associated Families: 6

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	4
All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dojkabacteria → Candidatus Dojkabacteria bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Wastewater Viral Communities From Wastewater Treatment Facility In Singapore
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Unclassified → Wastewater → Wastewater Viral Communities From Wastewater Treatment Facility In Singapore

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Singapore: Singapore
• Coordinates
  • Lat. (^o): 1.332
  • Long. (^o): 103.756
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F030944	Metagenome / Metatranscriptome	184	Y
F032274	Metagenome / Metatranscriptome	180	Y
F051532	Metagenome / Metatranscriptome	144	Y
F073596	Metagenome / Metatranscriptome	120	N
F073597	Metagenome / Metatranscriptome	120	Y
F086646	Metagenome / Metatranscriptome	110	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
IF_consensus_for_cluster_6836	Not Available	536
IF_singleton_cluster_11136	Not Available	522
IF_singleton_cluster_14547	Not Available	517
IF_singleton_cluster_17725	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	512
IF_singleton_cluster_19656	Not Available	510
IF_singleton_cluster_3953	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dojkabacteria → Candidatus Dojkabacteria bacterium	541

Sequences

Scaffold ID	Protein ID	Family	Sequence
IF_consensus_for_cluster_6836	IF_00046650	F073596	MNVFXKIKLWFTSISKIVKFLTDTFGEAKILKDKQANFKDWVEFVIAFIKDAIQYADEIAALAQSQPVQTERAGNKSRXNRTRLFQPXFKTAYFKEKAKNFNK
IF_singleton_cluster_11136	IF_00319490	F086646	MFWHHIKAKMNLGAINNWIFIFRIQNHYFEKGTPWVELDKIKQRSWFLSVDIEDDEVVPCYDTVSELRLSKGVAFKSVKILTGKTQETHPYWEALLDMSYSNSTELRDVTFKDLPGESGIYSLDIGFDYDDEELKFGDDFKKLCEYRHKWDDGWVCSKCGVRK
IF_singleton_cluster_14547	IF_00543640	F030944	MERXFSITPKLGNRINNYTPPRQVDRNNKNKNKMKNMNTTLEIPEGSKAVISGKVIDGKNYLVVEVEQEPELKEGDLCIFWDYTPREAIIAPYQHFVDGNYVDHMDIYWDNAIKWDGTKE
IF_singleton_cluster_17725	IF_00824970	F051532	EKKYEEELAEDIMKILTCYSARFYGARGGRKKKNVAENEPNESDGI
IF_singleton_cluster_19656	IF_00435770	F032274	MLRQWLGVVSLLKRELGLEKTMQVSFDFTEQTEIVKREKRKHLEARQDWQRAPKIIVTEEYIALDKKLEPIEEELFDLIKKMPLAIEKKIKGKICVIPSGLKTDEELISRVRELRKQASKIGKELDDL
IF_singleton_cluster_3953	IF_01483420	F073597	LPFSRRQALTKRGGMETGCFLLQGNQFVAGGRKFVLKRRKKPTPNKPELFLIQLQPFKYISSLFPAGEEGLYTFDYEGQLYILKKGEAQVVIAEEE