2058419001: Saline water microbial communities from Great Salt Lake, Utah, sample from South Arm Antelope Island 1

Overview

Basic Information

• IMG/M Taxon OID: 2058419001
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0060782 | Gp0051505 | Ga0026394
• Sample Name: Saline water microbial communities from Great Salt Lake, Utah, sample from South Arm Antelope Island 1
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 67538519
• Sequencing Scaffolds: 35
• Novel Protein Genes: 37
• Associated Families: 10

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	33
All Organisms → Viruses → Predicted Viral	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Saline Water Microbial Communities From Great Salt Lake, Utah
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water → Saline Water Microbial Communities From Great Salt Lake, Utah

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → lake → saline water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Location: Great Salt Lake, Utah
• Coordinates
  • Lat. (^o): 41.454358
  • Long. (^o): -112.666397
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F005874	Metagenome	387	Y
F032166	Metagenome	180	Y
F038111	Metagenome	166	N
F050177	Metagenome	145	N
F056354	Metagenome	137	N
F063375	Metagenome	129	N
F073153	Metagenome	120	N
F075754	Metagenome	118	N
F086685	Metagenome	110	N
F100427	Metagenome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length
GSLSAAI_contig02271	Not Available	840
GSLSAAI_contig05300	Not Available	1588
GSLSAAI_contig05328	Not Available	795
GSLSAAI_contig05359	Not Available	532
GSLSAAI_contig05615	Not Available	1328
GSLSAAI_contig05632	Not Available	754
GSLSAAI_contig05703	Not Available	1259
GSLSAAI_contig05794	All Organisms → Viruses → Predicted Viral	1050
GSLSAAI_contig05836	All Organisms → Viruses → Predicted Viral	2714
GSLSAAI_contig06426	Not Available	1087
GSLSAAI_contig08290	Not Available	1003
GSLSAAI_contig10598	Not Available	955
GSLSAAI_contig10657	Not Available	771
GSLSAAI_contig10684	Not Available	1274
GSLSAAI_contig10831	Not Available	507
GSLSAAI_contig11665	Not Available	601
GSLSAAI_contig12685	Not Available	4777
GSLSAAI_contig13588	Not Available	1271
GSLSAAI_contig13711	Not Available	1343
GSLSAAI_contig13740	Not Available	1454
GSLSAAI_contig13760	Not Available	1484
GSLSAAI_contig13817	Not Available	1251
GSLSAAI_contig13830	Not Available	1238
GSLSAAI_contig13835	Not Available	1391
GSLSAAI_contig13843	Not Available	1205
GSLSAAI_contig13999	Not Available	1120
GSLSAAI_contig14012	Not Available	1538
GSLSAAI_contig14058	Not Available	949
GSLSAAI_contig14159	Not Available	1216
GSLSAAI_contig14170	Not Available	1183
GSLSAAI_contig14212	Not Available	825
GSLSAAI_contig14479	Not Available	779
GSLSAAI_GCWP1347_b1	Not Available	838
GSLSAAI_GFP0ZZ301BFNZL	Not Available	500
GSLSAAI_GFP0ZZ301BL9H0	Not Available	502

Sequences

Scaffold ID	Protein ID	Family	Sequence
GSLSAAI_contig02271	GSLSAAI_01226000	F032166	TVDELEAFRASEYNEEYLEYNSDRAQAGNEPLDDVITLLETPPDEWRDVEDGFNEIAEARELLDFQRRTQGQIKSQGLGSNTIAEYDDMTFREAASIRWGIDPDDDREWL
GSLSAAI_contig05300	GSLSAAI_01410220	F056354	MIVELFIVLSIIATLITGMAIRGDIPELLGAFVGAVMSIVAAINALDLIVITNSGTTKNLDPQVDIALILLLIFIVNIIFIFDRAFSPGE
GSLSAAI_contig05328	GSLSAAI_01321210	F050177	MARIPSDPPDDELTPRQLHDRVDEVVNLTVDELEAFRASEYNEEYLEANSDRAQAGNEPLDDVITLLETPPDEWRDVEDGFNEIAEARELLDFQRRTQAQIKSQGLGSNTISEYDDMTFREAASIRWGIDPDDDRE
GSLSAAI_contig05359	GSLSAAI_01602300	F075754	MNYQTDLRWHTPMNPWEPIHVRVDDSSDWYRTQVERGDYLRDTEEDAEMSHREHGLVAEAIVKAVFPGFEWWDTESFDLFRGQTRYDIISRNINRGEPRQNYLHHLPPKKEERAKPSTNYYAVVRKHPDYWLIGHINSVRFWYLCDRTKPEWWNEQDYEGGHLTYEHFKQIK
GSLSAAI_contig05528	GSLSAAI_01716660	F100427	ATIGHELTHYIFWVPIATDIEWDVWGNELEIEHIATPWAMRWAIVASMAPLLVGTVVLMYWLSTQPAVTTHSAVMGIGLAVYTFAGGKADYGRLTDAVTARLA
GSLSAAI_contig05615	GSLSAAI_00423990	F073153	MSEQDLPVRDEIARIDGNIEGILTRLGQQGESVARLDLLVEEMKEMQAELEHIEVRLNTLEGRID
GSLSAAI_contig05632	GSLSAAI_01383120	F032166	PHREELEAFRESEYNEEYLAANSERAQRGNEPLDDVIRLLETPPEEWRDVDDGFNEIAEARELLDFQRRTQAQIKSQGLGSNTIAEYDDMTFREAASIRWGIDPDDEREWL
GSLSAAI_contig05703	GSLSAAI_00863090	F032166	MSPSTDAIRLLETPGYEYSAVDDGFNEVEEAKELLDFQRRTQAQIASQGLGENFLTDARDMQVREAASIRWGIDPDDDREWL
GSLSAAI_contig05794	GSLSAAI_01509350	F050177	MARIPSDPPDDQLTPQQLAERVDDITNLTVEELEMFRASEYNEQYLEGNSDRAQRGNEPLDDVIRLLETPPQQWRDVDDGFNEVQEARELLDFQRRTQAQIKSQGLGSNTLREYDDMTFREAASIRWGIDPDDEREWL
GSLSAAI_contig05836	GSLSAAI_01577600	F005874	MVEIPSVPPDDALTPQQLHDRVEAVTNLDAEQLRAFKRSDYNAAYRQAASDAAQPGDEPLDDTIRLLETPPAAYRDVDDGFNEVDQARELLDFQRRTQAQIASQGLGSNFLTDEMDMQRREAASIRWGIDPDAEREWL
GSLSAAI_contig06426	GSLSAAI_00469080	F075754	MTYQAGLGWHTPMNPWEPIHVRVDESSEWYEAQLERADFLRDTEEDAEMHHRKDGYVAEGLVKAVFPAMEWWDTNSFDGFLGGRRYDIISRSLNRGEPRQHYVHKIQLKKEERAKPSTHYYAVVRSHPDYWLIGHINSIRFWYLCDRSTPEFWDDEQFEGGYLSYEHFKQLEHQTPITPPPGIEVFGQG
GSLSAAI_contig08290	GSLSAAI_01680800	F086685	FVILGHELTHYIAWLPVASSIEYHFEEQYIEAEYPDTPFARKWAVLAGISPVIVATGLLLALIATGWQPTATWHHITASVAVLLYGISGGKSDFDALFNLVRTLRATS
GSLSAAI_contig10598	GSLSAAI_00051360	F005874	MRMRARKQTMAMIPNMPPDDDLTPAELYDRVEDITNLTVEELQAFKGSDYNEIYNARKSDAAQRKDEPLDDVIRLLSTEPAEWRDVDDGFNEVDEAEELLNFQRRTQAQIASQGLGENYLTEEQDMTMREAASIRWGLTLMLRGSGCNGTGLLRDQGRWAVEGEA
GSLSAAI_contig10657	GSLSAAI_00041200	F005874	VSRTLNLDAEQLRAFKRSDYNAAYLEVASDAAQPGDEPLDDTIRLLETPAAAYRDVDDGFNEVEEARELLDFHRRTQAQIASQGLGSNFLTDAENMQKREAASIRWGIDPDEEREWR
GSLSAAI_contig10684	GSLSAAI_01025020	F005874	MAKIPSRPPDDMLSPEELYDRVEDTVNLSVDDLFAFKRSEYNEEYNARKSDAAQAKDEPLDDVIRLLSTPPEAWKDEDDGFNEVEEAEELLDFQRRTQAQIASQGLGMNFLGDDQDMTMREAASIRWGIDPDDEREWL
GSLSAAI_contig10831	GSLSAAI_00807130	F073153	VITNERTGPPVRDEIRRIDGNIEGILTRLGNQSETIARIDLLVEEMQEMQTELEHIEVRLNTLE
GSLSAAI_contig11665	GSLSAAI_00236250	F032166	PEQWRDVEDGFNEIAEAREMLDFQRRTQAQIKSQGLGSNTLPEYDDMTFREAASIRWGIDPDDDREWL
GSLSAAI_contig12685	GSLSAAI_01225870	F086685	MIELTTIPLVVWVIGCITFVILGHELTHYIAWLPVATSIEYHFEDQYIEAEYPDTPFARKWAVVAGISPVIVATGLVLALIATGWDPTATWHHITASAAVVLYGVSGGKSDFEALLALIKTRGSLG
GSLSAAI_contig13588	GSLSAAI_00834740	F005874	MGYGIPDDPPDQDLTPQQLHDRIDEVTNLSADELRAFKDSDFNEAYNMAKSDAAQPGDEPLDDVIRLLETPASQYRDMDDGFNEVEEGRELLSFQRRTQAQIESQGLGENYLTDLEVMQVREAASIRWGIDPDDEREWL
GSLSAAI_contig13711	GSLSAAI_01263080	F086685	MIDITTIPLVLWVLGCITFVILGHELTHYIAWLPVASSIEYHFEEQYIEAEYPDTPFARKWAVVAGISPVIVATGLLLALIATGWQPTATWHHITASVAVVLYGISGGKSDFDALFNLVRTLRSPAAE
GSLSAAI_contig13740	GSLSAAI_01369060	F032166	VITLLETPPEQWRDVEDGFNEIAEAREMLDFQRRTQAQIKSQGLGSNTLPEYDDMTFREAASIRWGIDPDDEREWL
GSLSAAI_contig13760	GSLSAAI_01423990	F005874	MAKIPSRPPDDMLSPEELYNRVEETVNLSVDDLFAFKRSEYNEEYNARKSDQAQAKDEPLDDVIRLLSTPPEAWKDEDDGFNEVQEAEELLDFQRRTQAQIASQGLGMNFLGDDRDMTMREAASIRWGIDPDDDREWL
GSLSAAI_contig13817	GSLSAAI_00462280	F056354	ITGMAIRGDIPELLGAFVGAVMSIVAAINALDLFVITNSGNVKNLDPQVDIALILLLIFIVNIIFIFDRAFSPGE
GSLSAAI_contig13830	GSLSAAI_00939070	F050177	MARIPSDPPDDALTPRQLHDRVDDVVNLSVEELEAFRASEYNEEYLEYNSERAQRGNEPLDDVIRLLETPPDQWRDVDDGFNEIAEARELLDFQRRTQAQIESQGLGSNTIAEYDDMTFREAASIRWGIDPDDEREWL
GSLSAAI_contig13835	GSLSAAI_01130530	F050177	MARIPSDPPDDALTPRQLADRVDDVVNLSVEELEAFRASEYNEEYLEYNSERAQQGNEPLDDVIRLLETPPDQWRDVDDGFNEIAEARELLDFQRRTQAQIESQGLGSNTIAEYDDMTFREAASIRWGIDPDDEREWL
GSLSAAI_contig13843	GSLSAAI_01434410	F050177	MARIPSDPPDDALTPRQLHDRVDDVVNLSVEELEAFRASEYNEEYLEYNSERAQRGNEPLDDVITLLETPPDEWRDVDDGFNEVAEARELLDFQRRTQAQIKSQGLGSNTIAEYDDMTFREAASIRWGIDPDDEREWL
GSLSAAI_contig13999	GSLSAAI_00287790	F005874	MGYGIPDDPPDRDLTPQQLHDRIDEVTNLSADELRAFKDSEFNAAYNMAKSDAAQPGDEPLDDVIRLLETPASKYRDVDDGFNEVEEGRELLSFQRRTQAQIESQGLGENYLTDLEVMQVREAASIRWGIDPDDEREWL
GSLSAAI_contig14012	GSLSAAI_00318570	F086685	VSSSPDTSMIELTTIPLVVWVIGCITFVILGHELTHYIAWLPVATSIEYHFEDQYIEAEYPDTPFARKWAVVAGISPVIVATGLVLALIATGWDPTATWHHITASAAVVLYGVSGGKSDFQALLNLGRTRRSPAADD
GSLSAAI_contig14058	GSLSAAI_00201800	F050177	QLADRVDDVVNLSVEELEAFRASEYNEEYLEYNSERAQRGNEPLDDVITLLETPPDEWRDVDDGFNEIAEARELLDFQRRTQAQIKSQGLGSNTIAEYDDMTFREAASIRWGIDPDDEREWL
GSLSAAI_contig14159	GSLSAAI_00661870	F086685	VILGHELTHYIAWLPVATSIEYHFQDQYIEAEYPDTPFARKWAVVAGISPVIVATGLVLALIATGWDPTATWHHITASAAVVLYGVSGGKSDFEALLNLGRTRRSPAADD
GSLSAAI_contig14170	GSLSAAI_00682940	F073153	MSEQDMPVRDEIARIDGNIEGILTRLGQQGESVARLDLLVEEMKEMNQQLEHIEIRLNTLEGRID
GSLSAAI_contig14212	GSLSAAI_01633140	F056354	MILSVFIALSITAVLITGLAIRGDIPELLGAAVGAIMSIVASINALDLFVITNSGNVKDIAPQTDIALILLVIVVINLIFIFDRAFSPGS
GSLSAAI_contig14479	GSLSAAI_01259840	F056354	MILPVFIALSITAVVITGLAIRGDIPELLGAAVGAIMSIVAAINALDLFVITNSGNVKDIAPQTDIALILLVIFVINLIFIFDRAFSPGS
GSLSAAI_GCWP1347_b1	GSLSAAI_01286680	F063375	MTSIELNNRQLAIIETVGGHLQAVIAYGAVFMGGVIIGFESSDYPMMWPITQSYTGKAVTYPYTQLLELGMGVLAACIVVILILEWVMYLHDR
GSLSAAI_GFP0ZZ301B1KL4	GSLSAAI_00438140	F038111	NFIHADVYKYNKTVREDFGKDLDKLMDLHVDPLYVLTKTDNKKLKKFMSIYGLELDHRPNCDDGVAREVFRLTRRQ
GSLSAAI_GFP0ZZ301BFNZL	GSLSAAI_00687010	F038111	MIHRVPVVKRPEYTIWLENYKGIANFIHADVYKYNKTVREDFGKDLDKLMDLHVDPLYVLTETDNKKLKKFMSIYGLELDHRPDCDDGVAREVFRLTRRQ
GSLSAAI_GFP0ZZ301BL9H0	GSLSAAI_01376500	F032166	KSDAAQPGDEPLDDLIRLLETPDDQWRDAEDGFNEVQQARELLDFQRRTQGQIREQGLGENYVTDVQEMQFREAASIRWGIDPDDDREWL