2028778000: Viral communities in wastewater treatment process (IF-no assembly)

Overview

Basic Information

• IMG/M Taxon OID: 2028778000
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0045482 | Gp0051552 | Ga0011135
• Sample Name: Viral communities in wastewater treatment process (IF-no assembly)
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Illinois, Urbana-Champaign
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 125267136
• Sequencing Scaffolds: 11
• Novel Protein Genes: 12
• Associated Families: 11

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	1
Not Available	10

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Wastewater Viral Communities From Wastewater Treatment Facility In Singapore
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Unclassified → Wastewater → Wastewater Viral Communities From Wastewater Treatment Facility In Singapore

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Singapore: Singapore
• Coordinates
  • Lat. (^o): 1.332
  • Long. (^o): 103.756
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F024534	Metagenome / Metatranscriptome	205	Y
F030944	Metagenome / Metatranscriptome	184	Y
F033445	Metagenome / Metatranscriptome	177	N
F033819	Metagenome / Metatranscriptome	176	Y
F056507	Metagenome / Metatranscriptome	137	Y
F068794	Metagenome / Metatranscriptome	124	N
F071272	Metagenome / Metatranscriptome	122	N
F075677	Metagenome	118	Y
F078200	Metagenome / Metatranscriptome	116	Y
F086646	Metagenome / Metatranscriptome	110	Y
F102391	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
IFn_FTWC1V110GANZ5	All Organisms → cellular organisms → Bacteria	515
IFn_FUOFX6F01AIIEZ	Not Available	509
IFn_FUOFX6F01B1MUM	Not Available	542
IFn_FUOFX6F01DY2WT	Not Available	503
IFn_FUOFX6F01E0HZ8	Not Available	522
IFn_FUOFX6F01EI8A7	Not Available	504
IFn_FUOFX6F01EPUDL	Not Available	518
IFn_FUOFX6F02H4PFU	Not Available	517
IFn_FUOFX6F02H6O3O	Not Available	544
IFn_FUOFX6F02HQBAL	Not Available	548
IFn_FUOFX6F02IBHZN	Not Available	517

Sequences

Scaffold ID	Protein ID	Family	Sequence
IFn_FTWC1V110GANZ5	IF_na_1376640	F068794	MKKAKGFVFNHQTITIRGSFINMLFTVVLMVLFVAAAFNASVAANLKLVAELIIAIYAISYGVWRGMKAWENKKEKKEEEAA
IFn_FUOFX6F01AIIEZ	IF_na_2555690	F024534	PDVFMLASLVQFKYVQDISEPNDTNFKVSMAGGHYTFGKPGQYDKFMDKYLTWLEMRN
IFn_FUOFX6F01B1MUM	IF_na_334060	F033445	AGKIVVELERGRFCEQEVVQYEVSVKELSIQIESLKTQVETMSKKFDETLKQLDTERKIADEKDKARLEEIKAAGKPQWTMLFGGFGAGP
IFn_FUOFX6F01DY2WT	IF_na_3044210	F078200	ANQIAALKELYVDDKDYMKNIVYAKNPLLAMVPKNESPDGFAGKYIPRAARIR
IFn_FUOFX6F01E0HZ8	IF_na_650230	F086646	NKDERCGKCGRMFWHHIKAKMNLGAINNWIFIFRIQNHYFEKGTPWVELDKIKQRSWFLSVDIEDDEVVPCYDTVSELRLSKGVAFKSVKILTGKTQETHPYWEALLDMSYSNSTELRDVTFKDLPGESGIYSLDIGFDYDDEELKFGDDFKKLCEYRHKWDDGWVCSKCGVRK
IFn_FUOFX6F01EAEVN	IF_na_1339870	F075677	MVGPNNSNMKGDYTMINMTEVIANVTLTKVCSIKPDKDSDEHKTITLRIKFDGATVQSVFDKAVSGAVIQWQNGVGRKGFDTFKNNQTIDIQFNAPASRTAEAPES
IFn_FUOFX6F01EI8A7	IF_na_2906840	F071272	WNGSKARVYKAAVDQLAESMAGGAWQDGPAPKDGSWILGLFHGLPYVVAYDSWEVGGETLPDWSGSPPDGYESGWCLAGDNLHVMDKDEPEKWARIIHPNRHMPASWDGPGNRS
IFn_FUOFX6F01EPUDL	IF_na_582120	F033819	MRLSMDASEPKQSRVTNTAIQSQLVELSVRLTRMEKDIQEIKKTLFESDKKIGDMEKNEAGRNPLIERRLDNLEKRTDKHGAEIDELIKITQSLANTNKVLTWVAGLAGAGVLSWLIAQILSLIG
IFn_FUOFX6F02H4PFU	IF_na_4505220	F030944	MKNMNTTLEIPEGSKAVISGKVIDGKNYLVVEVEQEPELKEGDLCIFWDYTPREAIIAPYQHFVDGNYVDHMDIYWDNAIKWDGTKEQ
IFn_FUOFX6F02H6O3O	IF_na_1705830	F102391	KLDGNGDIVLNSSTGLSVQVSGQASLEQDAMSECRCEQQGWFADDTYGRNPLVWKLPTSNNDKVADIKRIVTKYYQPQSIAYSNGYFVVS
IFn_FUOFX6F02HQBAL	IF_na_1206560	F033445	ADAGKIVVELERGRFCEQEVVQYEVSVKELSIQIESLKTQVETMSKKFDETLKQLDTERKIADEKDKARLEEIKAAGKPQWTMLFGGFRGPGPCLSVRWCYFFKKQ
IFn_FUOFX6F02IBHZN	IF_na_814180	F056507	MIKGQAKTEAVYRAILLDSSSSLKEFSMDRKKYYNKYYLGKNIEDKDSQAAIM