2027040003: Viral communities in wastewater treatment process (AS-no assmebly)

Overview

Basic Information

• IMG/M Taxon OID: 2027040003
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0045482 | Gp0051553 | Ga0011134
• Sample Name: Viral communities in wastewater treatment process (AS-no assmebly)
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Illinois, Urbana-Champaign
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 134666693
• Sequencing Scaffolds: 11
• Novel Protein Genes: 11
• Associated Families: 10

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	1
Not Available	6
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. Leaf73	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter → Helicobacter pylori	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes shahii	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Wastewater Viral Communities From Wastewater Treatment Facility In Singapore
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Aerobic) → Activated Sludge → Wastewater → Wastewater Viral Communities From Wastewater Treatment Facility In Singapore

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Singapore: Singapore
• Coordinates
  • Lat. (^o): 1.332
  • Long. (^o): 103.756
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000388	Metagenome / Metatranscriptome	1201	Y
F003622	Metagenome / Metatranscriptome	476	Y
F023334	Metagenome / Metatranscriptome	210	Y
F043390	Metagenome / Metatranscriptome	156	N
F045749	Metagenome / Metatranscriptome	152	Y
F051532	Metagenome / Metatranscriptome	144	Y
F060712	Metagenome / Metatranscriptome	132	Y
F071210	Metagenome / Metatranscriptome	122	N
F082381	Metagenome	113	Y
F083928	Metagenome	112	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
ASn_FUOFX6F01A0NS8	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	502
ASn_FUOFX6F01A1I4B	Not Available	530
ASn_FUOFX6F01B04ZT	Not Available	502
ASn_FUOFX6F01B6020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. Leaf73	510
ASn_FUOFX6F01BF9Y3	Not Available	517
ASn_FUOFX6F01C2L4K	Not Available	511
ASn_FUOFX6F01DB6R3	Not Available	504
ASn_FUOFX6F01DK2PF	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter → Helicobacter pylori	518
ASn_FUOFX6F02GCJQ9	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes shahii	501
ASn_FUOFX6F02GOIP1	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium	546
ASn_FUOFX6F02JUO78	Not Available	547

Sequences

Scaffold ID	Protein ID	Family	Sequence
ASn_FUOFX6F01A0NS8	AS_na_2588140	F060712	ITTLTDIANRALQVPGTRTTVTDAELAGNTTNEAIQINLVADSIRRQLIRMAPWDSALKTANLVYISSTPGTPENTSAATTLWQPGQPSPPWAYEYQYPVDCLRACWIIPATQ
ASn_FUOFX6F01A1I4B	AS_na_979160	F045749	RFLCDVWAHTNESELFDYFGGRDAASDYFEMLFSESEKHAGALKTYLLNHKISEDFKPQGRAPDTESRKQMIQAAISPEHCLVEDLINKHECGVINGLVLDVTWLAKQCEIDGEMLPPTRTLAHILNDMGYQQIEGRRLKIQKTGNYHYIWHKNTRNNSSEDVKNIIRDFYKNNLD
ASn_FUOFX6F01B04ZT	AS_na_397120	F023334	NLVTPLLAQLEKAKAGGPKNLRWGGNNVYWDVVVGRPSGSTFSSIGYFPPDTTATERQANVGVVRAYTTRQIDGLAFVGTQSKQAAFETIARKTMDEIKDASRLLMQQALHNKANGVVALVTTVNSTTSIDVGSPYAISGAGQGALLISVGDTIAVLDTSGADAVLG
ASn_FUOFX6F01B6020	AS_na_1350400	F083928	MNFLTYLNGLRPAIPMSMEKPTTVMSNGELRRHIEQGGVLVNGEKAAVNEEIDFPVFSLIFFPASKRRRTTLV
ASn_FUOFX6F01BF9Y3	AS_na_1464130	F071210	MKEKRWLGTQKYELHCFYCGGFHITGNCPQIVKEMNGWKYDRSCPETGHIKIVPNGDEYPTVLAFNGYHYRVVGLWGVPGKLLWLELQRFYGDTIVAATFCPDELMEMDLGMSDDEQLSAWLGGLPFLSVSPPEF
ASn_FUOFX6F01C2L4K	AS_na_2435650	F082381	MGKENIKLKRGGKRPFSGRKKADYQTKTIAFRVRVQWVEAIKSMVKDKIADLSQKCS
ASn_FUOFX6F01DB6R3	AS_na_773710	F045749	FGGRDAASDYFEMLFSESEKHAGALKTYLLNHKISEDFKPQGRAPDTESRQQMIQAAISPEHCLVEDLINKHECGVINGLVLDVTWLAKQCEIDGEMLPPTRTLAHILNDMGYQQIEGRRLKIQKTGNCHYIWHKNTRNNSSEDVKNIIRDFYKNT
ASn_FUOFX6F01DK2PF	AS_na_921880	F051532	EEELAEDIMKILTCYSARYYGARGGRKKKIKIENEPVESNGI
ASn_FUOFX6F02GCJQ9	AS_na_2602980	F003622	MRSYKNELEAIANDLLTQNAEAKGNENKPNYSNRDFMNATIIFQTALMDKMYDNQDYDGMSMDDRMKMAESCGLALRKLIHTYTGLDTHKIEEFL
ASn_FUOFX6F02GOIP1	AS_na_1575940	F043390	MGYMVKNEDSQKVITLTLTAEQLEVIDGALEMYCMGLAEQNDPHLKYATNAHEAIYNVLESNFGVEA
ASn_FUOFX6F02JUO78	AS_na_2157540	F000388	MKVIKVMKEYFQTEDEKVYFFEPLEKEISVEDMQKIVDANEKLVKELKKWEKHTQIENQ